Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02106 ATGGCGGTTACACCATTTGGTAGTACATCAGCTACTCAATGGGGAATTCGTCCTCACCTTATCTCTAGATCCAGTACCTTGGCCAAATTTGCATCATCAGGCCACAATGTTACAAGCAAGATAAGCTTTATGTCAGCCCCAAGTTCAACCTTTTTTGCTCGGGATACCTTGCGTTTTAACATAGGTTCATATCAAACTGTTAATCGTCGAAGGGGATCAAGGTTGATAGTCAGAGCAGATGCAGATTACTACACCGTCCTTGGGGTGTCAAGAAATTCTACTAAATCTGAAATTAAGAGTGCTTATCGGAAGCTTGCCCGAAATTATCATCCAGATGTGAACAAGGATCCCGGTGCAGAAGATAAATTTAAGGAAATTAGTAATGCATATGAGGTCTTATCAGATGATGATAAACGATCCATATATGATAAATATGGGGAGGCAGGACTTAAAGGTTCTGGAATGGGCACAGGGGATTTCAGCAATCCGTTTGATCTGTTTGAGACGCTGTTTGAGGGCATGGGTGGCATGGGCGGAAGAAGTTCTTGGAATGGAGCAGTTGATGGTGAAGATGAGTACTACAGTCTTGTTTTAAACTTTAAAGAAGCCGTTTTCGGAGTGGAAAAGGAGATAGAGATTAGGCGATTAGAGAGTTGTGGAACTTGCGACGGTTCaggggctaaaccagggactaaatcatcaagatgtaacacttgtggtggtcagggtcgggttgtcacgtcaacaagaactccattaggtatctttcagcagtcaatgacttgctcttcttgcaacggaactggagaaactcgaacaccttgcagtacatgttctggagatggtcgggtgaggaAAACCAAGCGGATAAGTCTCAAGGTTCCAGCCGGTGTGGATTCCGGTAGCCGTTTAAGGGTCCGAAATGAAGGCAATTCTGGAAGGCGTGGTGGTTCTCCCGGTGACCTCTTTGTTGTTCTTGAAGTAATCCCTGATCCCGTGCTTAAACGAGAAGACACCAACATTTTATACTCTTGTAAAGTGTCTTATATCGATGCAATCTTGGGGACTACAACTAAGGTTCCAACTGTAGATGGCATGGTAGATTTGAAAATCCCAGCAGGGACACAACCAGGATCAACACTTGTTATGGCCAAGAAAGGTGTTCCTCTGCTGAATAAAAAGAATATGAGGGGCGATCAACTGGTTCGAGTTCAAGTCGAGATTCCTAAAAAACTTAGCGGCGACGAGAGAAAACTTATCGAGGAACTTTCGGAGTTAAGCAAAGGTAAGACTACCGCCAGTAGGAGATGA 1311 0.376 MAVTPFGSTSATQWGIRPHLISRSSTLAKFASSGHNVTSKISFMSAPSSTFFARDTLRFNIGSYQTVNRRRGSRLIVRADADYYTVLGVSRNSTKSEIKSAYRKLARNYHPDVNKDPGAEDKFKEISNAYEVLSDDDKRSIYDKYGEAGLKGSGMGTGDFSNPFDLFETLFEGMGGMGGRSSWNGAVDGEDEYYSLVLNFKEAVFGVEKEIEIRRLESCGTCDGSGAKPGTKSSRCNTCGGQGRVVTSTRTPLGIFQQSMTCSSCNGTGETRTPCSTCSGDGRVRKTKRISLKVPAGVDSGSRLRVRNEGNSGRRGGSPGDLFVVLEVIPDPVLKREDTNILYSCKVSYIDAILGTTTKVPTVDGMVDLKIPAGTQPGSTLVMAKKGVPLLNKKNMRGDQLVRVQVEIPKKLSGDERKLIEELSELSKGKTTASRR 436
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02106 436 PANTHER BNAA01G34580D PROTEIN 33 436 - -
Car05g02106 436 Gene3D - 219 282 - -
Car05g02106 436 PANTHER DNAJ HOMOLOG 1, MITOCHONDRIAL-RELATED 33 436 - -
Car05g02106 436 Hamap Chaperone protein DnaJ [dnaJ]. 79 432 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Car05g02106 436 SUPERFAMILY Chaperone J-domain 79 179 IPR036869 -
Car05g02106 436 CDD DnaJ_zf 219 282 IPR001305 GO:0031072|GO:0051082
Car05g02106 436 Pfam DnaJ domain 82 143 IPR001623 -
Car05g02106 436 SUPERFAMILY HSP40/DnaJ peptide-binding domain 187 341 IPR008971 GO:0006457|GO:0051082
Car05g02106 436 Pfam DnaJ C terminal domain 194 409 IPR002939 -
Car05g02106 436 SUPERFAMILY HSP40/DnaJ peptide-binding domain 334 420 IPR008971 GO:0006457|GO:0051082
Car05g02106 436 Gene3D - 189 324 - -
Car05g02106 436 TIGRFAM DnaJ_bact: chaperone protein DnaJ 82 425 IPR012724 GO:0005524|GO:0006457|GO:0009408|GO:0051082
Car05g02106 436 Pfam DnaJ central domain 219 282 IPR001305 GO:0031072|GO:0051082
Car05g02106 436 CDD DnaJ 82 135 IPR001623 -
Car05g02106 436 SMART dnaj_3 81 138 IPR001623 -
Car05g02106 436 ProSitePatterns Nt-dnaJ domain signature. 123 142 IPR018253 -
Car05g02106 436 Gene3D DnaJ domain 79 182 IPR036869 -
Car05g02106 436 PRINTS DnaJ domain signature 84 102 IPR001623 -
Car05g02106 436 PRINTS DnaJ domain signature 102 117 IPR001623 -
Car05g02106 436 PRINTS DnaJ domain signature 118 138 IPR001623 -
Car05g02106 436 PRINTS DnaJ domain signature 138 157 IPR001623 -
Car05g02106 436 ProSiteProfiles dnaJ domain profile. 82 146 IPR001623 -
Car05g02106 436 Gene3D - 329 436 - -
Car05g02106 436 ProSiteProfiles Zinc finger CR-type profile. 206 287 IPR001305 GO:0031072|GO:0051082
Car05g02106 436 SUPERFAMILY DnaJ/Hsp40 cysteine-rich domain 206 286 IPR036410 -
Car05g02106 436 CDD DnaJ_C 190 412 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02106 Car-Chr5 66263852 66268759 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02106 83 145 C2H2 Transcription Factor Family AT1G74250 44.928 4.91e-09 56.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02106 K03686 - gmx:100786143 750.74