Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02100 ATGGAAGAAAGGTATGAGATTATTAAAGGTATTGGGTCAGGGAACTTTGGGGTAGCAAAGCTTGTAAGGGAGAGACAAAGTGGTAAACTATACGCTGTCAAGATCATTGATAGAGGCCTCAAGATTGATGAGCATGTGCAAAGGGAGATTATAAATCATAGGTCCTTGAAGCATCCTAATATCATTAGATTTAAGGAGgttctgtgtactccagctcatcttgctatagtgatggagtatgctgcagggggagaactatttgaaagaatatgcagtgctggtagattctgtgaggacgaggcaagatatttcttccaacagttgatttctggagtgagctattgtcattcaatgGAAATTTGCCATAGAGATCTTAAGCTAGAAAACACACTTTTAGATGGAAGCTCAGCACCACAACTCAAAATATGTGACTTTGGATACTCCAAGTCTTCTGTTCTGCATTCTCAGCCTAAATCTACAGTAGGAACTCCAGCATATATTGCACCAGAGGTACTGTCAAGAAGAGAATATGATGGGAAGGTTGCTGATGTTTGGTCTTGTGGGGTAACCTTGTATGTGATGCTTGTTGGAGGTTATCCTTTTGAAGATCCAGATGATCCACGAAATTTTAGAAAGACAATTGAGCGAATTCTTAGGGTCCAATATTCAATTCCAGACTATGTTCGAGTCTCCAAAGACTGTAGACATCTTCTATCTCAAATATTTGTGGCCAATCCTGAGAAGAGAATCACCATCCCAGAAATTAAAATGCACCCTTGGTTCCTTAATAAATTGCCAACAGAATTTGTAGAGGAAGGGAAAAGTAAGTTACAAAATGATGTGAATAATGTGGATGATTCATGTCAGAGTATTGAGGAAATACTGTCCATAATTCAAGAGGCAAGGAAACCAGGTGAGGGTCCAAGAGTTGATGGACAATTTGTTGGAGGAGGCATGGATCCTGATGAGATGGATGCAGATGATGATTTTGATAATGATATAGAAACAAGTGATGATTTTGATTTTGTGTGTGATATGTGA 1041 0.3285 MEERYEIIKGIGSGNFGVAKLVRERQSGKLYAVKIIDRGLKIDEHVQREIINHRSLKHPNIIRFKEVLCTPAHLAIVMEYAAGGELFERICSAGRFCEDEARYFFQQLISGVSYCHSMEICHRDLKLENTLLDGSSAPQLKICDFGYSKSSVLHSQPKSTVGTPAYIAPEVLSRREYDGKVADVWSCGVTLYVMLVGGYPFEDPDDPRNFRKTIERILRVQYSIPDYVRVSKDCRHLLSQIFVANPEKRITIPEIKMHPWFLNKLPTEFVEEGKSKLQNDVNNVDDSCQSIEEILSIIQEARKPGEGPRVDGQFVGGGMDPDEMDADDDFDNDIETSDDFDFVCDM 346
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02100 346 ProSitePatterns Protein kinases ATP-binding region signature. 11 34 IPR017441 GO:0005524
Car05g02100 346 Pfam Protein kinase domain 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02100 346 Gene3D Transferase(Phosphotransferase) domain 1 81 268 - -
Car05g02100 346 SMART serkin_6 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02100 346 CDD STKc_SnRK2 4 260 - -
Car05g02100 346 PANTHER SERINE/THREONINE KINASE 3 338 - -
Car05g02100 346 PANTHER SERINE/THREONINE-PROTEIN KINASE SAPK1 3 338 - -
Car05g02100 346 ProSiteProfiles Protein kinase domain profile. 5 261 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02100 346 SUPERFAMILY Protein kinase-like (PK-like) 3 271 IPR011009 -
Car05g02100 346 ProSitePatterns Serine/Threonine protein kinases active-site signature. 120 132 IPR008271 GO:0004672|GO:0006468
Car05g02100 346 Gene3D Phosphorylase Kinase; domain 1 1 80 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02100 Car-Chr5 66223140 66226091 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02100 4 286 CBL-interacting serine-threonine protein kinases AT4G24400 40.956 1.15e-67 216
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CAMK_OST1L Car05g02100 Pkinase 3.1e-70 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02100 K14498 - gmx:100807981 560.066
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g02100 05 66223140 66226091 Car05g02100 05 66223140 66226091 ECH