Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02082 ATGTTAGGTGAAGAGGGAAACGAGAAACCTTCCATTAGAAGAACCTATTCACGTTCAGTTTCATGGACAGATCGTTCTCCAAATACCCGTAAGCCACCACATGGAAACACTAAACCAAGATCATCCCTTTTGCCACCTCTTCAACCTCTTTCAATTAACAAACGTAGTGTTGAAGAATGGCCAAGTGCTGGATCTGATGATCTCGGTGTTTGGCCTCTTCCACAAACTCCAAGAGGGTCCATCACCACCTTTGAACCCACCAAAGATTTTCAGTTCAAAAGGGATAAATTGGCTTTCTTTGACAAAGAGTGTTCAAGAATTGCTGAACATATTTACTTGGGGAGTGACACAGTGGCCAAAAACCATGAACTTCTTAGACAGAAAGGAATAACACACGTGCTTAACTGTGTTGGATTCGTTTGTCCTGAGTATTTCAAAAGTGATTTTGTGTACAAAACACTTTGGTTGCAGGACAGTCCAACAGAGGATATTACAAGTATTCTCTATGATGTTTTTGATTACTTTGAGGATGTTAGAGAACAAGGTGGTCGTGTACTCGTTCATTGTTGTCAAGGGGTTTCTCGATCAAGTTCTTTGGTGATTGCTTATCTCATGTGGAGGAAGGGGCAGAGTTTTGAAGATGCTTTTCAGTTTGTGAAGACTGCAAGAGGAGTCACAAATCCAAACATGGGTTTTGCTTGTCAACTCTTGCAGTGTCAGAAACGTGTACATGCTATGCCTGCAAGTCCTAATTCTATTCTAAGGATGTATAGAATGGCTCCTCACTCACCTTATGACCCTCTTCATCTTGTTCCTAAGATGGTTAACCAACCAGGTTCACTAGCACTTGATTCTCGTGGCGCTTTCATTGTTCATGTTCCTTCTGCTATATATGTATGGATTGGGAAAAATTGTAACTTGGTTATGTCGTGCAATGCAAAAAGTGCTGCTTTTCAAGTTGTTCGTTATGAGGGGGCAAAGGGTCTAATTCTTAGCATCCATGAAGGTGAAGAAACGAATCAGTTTTGGTTTGCTCTTTCTGATGAGCAACGTTTCTCAGGTGATTCTGACAAAGACAAACAACTGGTGTTGAATTCTGAGAAGATGGAGATTGTTAAAAAGGGGATTGGTCTAAAAAAAGTTGATGCTTATGATTTGGATTTTGAGATTTTCCACAGAGCATTTGCTGGTGGGGTTGTTCCACCTTTTTCTGTATCTAATGCTGGATCAGAAACTTGTCTTCCTGCTAGAAAAGAAGAACATGGTTGGGCAAGACTGAGGAGGAAGTTTGTTAGTGGTGTCATGAAAGAGTTCTTAACATCCCCCAAATGGAAGTGTGATGTCATTATGGAGGAAGAAAAACAagattttgtagctgatgatgatcccttgtcagtgtcaccATCATCAAATCATCTGAGTGACTGTGGCTCCCCGGATTCCTTTGAATGTTTTCCAAACAGCTTAGGCAAGGCAAAAGATACTGTTATCGAAGCCATGGACTTGTCTGAATGTGACCCTGATGTTGTTTCTTTGATGCCACTATCTCCTTGTTTTCGAAGCAGCAGCTTAAAATTCAATTCAAAGTCACCGACACTTTCACCTTCAAGTTCTGATTATGCAAGTTCAATTACATTTTCGCCTTCTTCTACCAATTGGTCAGACTTGTCGGTTATGTCTTCTCGACAGCCATCACCGTCTGGCCAAGAATCAATTGAACCCTTTTATTTTAAGGATGTGTCTTTCTCAACAAGTCCCTCTTTATTTCACAAAGAAGTTCTCTTTTCACCTCCAGAGTCCTTTTCGACCGATCACACCTTGGGAGAGACAGACTCCTATTTGCCGTTGAAAGGATCTTCTCTTTCCATTGCAGAGCGTAGAGGGAGTAATCTACCACCTCGGATGTTGTTACCCTCTGTCAATGAATCCTCTCACGTTCACAAGAACCTGGAGGAATGCACGTACTAA 1968 0.4055 MLGEEGNEKPSIRRTYSRSVSWTDRSPNTRKPPHGNTKPRSSLLPPLQPLSINKRSVEEWPSAGSDDLGVWPLPQTPRGSITTFEPTKDFQFKRDKLAFFDKECSRIAEHIYLGSDTVAKNHELLRQKGITHVLNCVGFVCPEYFKSDFVYKTLWLQDSPTEDITSILYDVFDYFEDVREQGGRVLVHCCQGVSRSSSLVIAYLMWRKGQSFEDAFQFVKTARGVTNPNMGFACQLLQCQKRVHAMPASPNSILRMYRMAPHSPYDPLHLVPKMVNQPGSLALDSRGAFIVHVPSAIYVWIGKNCNLVMSCNAKSAAFQVVRYEGAKGLILSIHEGEETNQFWFALSDEQRFSGDSDKDKQLVLNSEKMEIVKKGIGLKKVDAYDLDFEIFHRAFAGGVVPPFSVSNAGSETCLPARKEEHGWARLRRKFVSGVMKEFLTSPKWKCDVIMEEEKQDFVADDDPLSVSPSSNHLSDCGSPDSFECFPNSLGKAKDTVIEAMDLSECDPDVVSLMPLSPCFRSSSLKFNSKSPTLSPSSSDYASSITFSPSSTNWSDLSVMSSRQPSPSGQESIEPFYFKDVSFSTSPSLFHKEVLFSPPESFSTDHTLGETDSYLPLKGSSLSIAERRGSNLPPRMLLPSVNESSHVHKNLEECTY 655
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02082 655 SUPERFAMILY Actin depolymerizing proteins 249 354 - -
Car05g02082 655 Gene3D Protein tyrosine phosphatase superfamily 83 245 IPR029021 -
Car05g02082 655 ProSitePatterns Tyrosine specific protein phosphatases active site. 187 197 IPR016130 GO:0016311|GO:0016791
Car05g02082 655 MobiDBLite consensus disorder prediction 1 48 - -
Car05g02082 655 CDD DSP 104 238 - -
Car05g02082 655 Pfam Dual specificity phosphatase, catalytic domain 111 241 IPR000340 GO:0008138|GO:0016311
Car05g02082 655 ProSiteProfiles Dual specificity protein phosphatase domain profile. 103 245 IPR020422 GO:0006470|GO:0008138
Car05g02082 655 SMART dsp_5 103 242 IPR020422 GO:0006470|GO:0008138
Car05g02082 655 Gene3D Severin 256 354 IPR029006 -
Car05g02082 655 MobiDBLite consensus disorder prediction 13 48 - -
Car05g02082 655 ProSiteProfiles Tyrosine specific protein phosphatases domain profile. 162 223 IPR000387 GO:0016311|GO:0016791
Car05g02082 655 PANTHER PROTEIN-TYROSINE-PHOSPHATASE MKP1 11 644 - -
Car05g02082 655 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 93 245 IPR029021 -
Car05g02082 655 PANTHER MKPA PROTEIN 11 644 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02082 Car-Chr5 66055573 66058360 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02082 1 139 Protein tyrosine phosphatase (PTP) family AT3G55270 39.785 1.04e-30 126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02082 - - lja:Lj6g3v0574850.1 924.465
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car06g00845 06 8309073 8311323 Car05g02082 05 66055573 66058360 PCT