Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02055 ATGGCTTTATTTTCTCTCTTTCTGCTCACACTTCTTCTGTTAATATCATGTGCTGCTTGCCAACTTCAAGAATTTATCAGCATTGATTGTGGAGGAACAAGAAGTAACTACACTGACACAAGCACAGGGCTTAAATGGATTTCAGATTCTGAGATTATGCAACATGGAGAGATAGTGGAAGTGCAAAACCCTAATGAAAACAAGGTTCAGTATCAGAATAGGAGAGATTTTCCAACAGATAGCAGAAAATATTGTTACACACTTGAGACTGAGGAGAGAAGAAGGTATTTGGTTAGAGCAACTTTTCAGTATGGAAGCTTGGAAAATGGAGATACATACCCTCAGTTTCAACTTTACTTGGATGCAACTAAATGGGCTACTGTTTCAATTAATGAGGACTCAAGAATATATGTTAAAGAAATGATTTTTAGGGCACCTTCAAATTCTGTTGATGTTTGCATGTGCTGTGCTACTACTGGCTCTCCTTTCATATCTACCCTTGAGCTTAGGCCTTTGAATCTTTCTATGTATGCCACTGATTTTGAGGATGATTTCTTCTTGAAAGTAGCTGCAAGAATTAACTTTGGTGCTCCAACTGAGGATGCTGTCAGGTATCCAGAGGACCCATATGATAGAATATGGGAGTCTGATCTTGTGAAAAGACAAAATTTTCTTGTTGGGGTGGCCCCAGGCACAGAAAGAATTAACACAACAAGGAACATAGAAATAGAGACAAGAGAATATCCACCAGTTAAGGTGATGCAAACAGCAGTTGTTGGCACAAAAGGAGTACTTAGCTACAGACTGAACCTAGAAGACTTTCCTGGTAATGCTAGAGCTTATGCATATTTAGCAGAGATTGAAGATCTGAGTCAGAATGAGACTAGGAAATTCAAATTGGAACAACCTTATATAGCTGACTATAGCAATGCAGTGGTGAACATAGCTGAGAATGCTAATGGTAGCTACACTCTTTATGAACCAAGTTACATGAATGTCAGTCTTGAATTTGTTCTTTCCTTCTCCTTTGTCAAGACCCGCGATTCGAATAGAGGACCTCTGCTAAATGCAATGGAAATAAGCAAATACCAAGAAATTGCTTCAAAGACCTTTAAGAAAGATTCAAACATTGTAAATGCATTTGCTTCCTTGTCTGACGAAAGTGTCCCAAAGAATGAAGGCGATCCTTGCGTTCCAACTCCTTGGGAGTGGGTGAATTGTAGTACCACTACACCTCCTAGAATTACAACAATAAACTTGTCACGAAGAAACATGACTGGTGAAATTCCACCAGAGCTCAACAACATGGAAGCCTTGACAGAATTGTGGTTAGATGGAAACTTGCTTACAGGACAACTACCAGACATGAGCAATCTTATCAATCTAAAAATTGTGCATCTCGAGAACAACAAATTGACTGGTCCGCTTCCGTCTTACCTTGGTAGTTTGCCAAGTTTACAAGCATTGTTCATACAGAATAACTCATTTTCAGGGGAAATACCAGCAGGATTATTATCTAGAAAAATCACATTCATCTATGATGATAACCCTGGACTGCATAGAAAGAACAAAAAGCATTTTAAGTTGATCATAGGAATTTCTATTGGAGTACTATTGATTCTATTAGTCCTGTTCTTAGCAAGTTTGGTGTTATTGCATAACCTGAGAAAAAAGGCTTCTCAAAAGAAAAGTGATGAAAAAGGTATTTCAGGACGTAGTGGTACTAAACCAACCGGATACTCTTTCGGTCGGGGTGGGAATTTAATGGATGAAGGTACTGCATACTATATTGCTCTCTCAGAATTGAAAGAAGCTACAAATAGTTTTTCAAAGAAAATTGGAAAAGGAAGCTTTGGATCTGTCTATTATGGGAAAATGAAAGACGGAAAAGAGATCGCAGTTAAGACTATGACCGATCCATCCAGTCATGGGAACCACCAATTTGTAACTGAGGTAGCCCTCTTATCAAGAATTCATCACAGAAACTTGGTTCCTCTCATTGGATATTGTGAAGAAGAATATCAACATATTCTGGTTTATGAGTATATGCACAACGGAACTCTTAGAGATCACATTCATGATTGTTCGAGTCAGAAGCAATTAGACTGGATAACTCGTCTTCGAATTGCAGAAGATTCTGCCAAAGGTCTTGAATACTTACATACAGGATGCAATCCTAGTATCATTCACCGAGACGTAAAGACAAGCAACATTCTCCTAGACATCAATATGAGAGCAAAAGTGTCAGACTTCGGACTCTCGAGACTAGCCGAAGAAGATTTAACGCATATATCAAGTGTTGCAAGGGGAACTGTAGGCTACTTGGATCCTGAGTACTATGCAAATCAGCAATTGACTGAAAAAAGTGATGTATATAGTTTTGGAGTTGTTCTGTTGGAACTGATATCTGGAAAGAAGCCGGTATCACCAGAAGATTATGGTCCAGAAGTGAATATAGTTCACTGGGCAAGATCTTTAATTCGTAAAGGCGATATAATTAGCATTATGGATCCTTTGCTAATTGGAAATGTCAAAACTGAGTCAATTTGGAGAGTTGCTGAAATTGCCATGCAATGTGTAGAATCACATGGTGCTTCAAGGCCAAGGATGCAAGAAGTGATTTTGGCTATACAAGATGCTTCCAAGATAGAAAAAGGAACAGAAAATCAGCTAAAAATATCATCCTCAGGTGATTCCAAACCACAATCTTCAAGGAAAACTTTGCTCACAAGCTTTCTTGAAATTGAGAGCCCTGATTTGTCAAATGGTTGCCTTCCATCAGCAAGATAA 2790 0.3857 MALFSLFLLTLLLLISCAACQLQEFISIDCGGTRSNYTDTSTGLKWISDSEIMQHGEIVEVQNPNENKVQYQNRRDFPTDSRKYCYTLETEERRRYLVRATFQYGSLENGDTYPQFQLYLDATKWATVSINEDSRIYVKEMIFRAPSNSVDVCMCCATTGSPFISTLELRPLNLSMYATDFEDDFFLKVAARINFGAPTEDAVRYPEDPYDRIWESDLVKRQNFLVGVAPGTERINTTRNIEIETREYPPVKVMQTAVVGTKGVLSYRLNLEDFPGNARAYAYLAEIEDLSQNETRKFKLEQPYIADYSNAVVNIAENANGSYTLYEPSYMNVSLEFVLSFSFVKTRDSNRGPLLNAMEISKYQEIASKTFKKDSNIVNAFASLSDESVPKNEGDPCVPTPWEWVNCSTTTPPRITTINLSRRNMTGEIPPELNNMEALTELWLDGNLLTGQLPDMSNLINLKIVHLENNKLTGPLPSYLGSLPSLQALFIQNNSFSGEIPAGLLSRKITFIYDDNPGLHRKNKKHFKLIIGISIGVLLILLVLFLASLVLLHNLRKKASQKKSDEKGISGRSGTKPTGYSFGRGGNLMDEGTAYYIALSELKEATNSFSKKIGKGSFGSVYYGKMKDGKEIAVKTMTDPSSHGNHQFVTEVALLSRIHHRNLVPLIGYCEEEYQHILVYEYMHNGTLRDHIHDCSSQKQLDWITRLRIAEDSAKGLEYLHTGCNPSIIHRDVKTSNILLDINMRAKVSDFGLSRLAEEDLTHISSVARGTVGYLDPEYYANQQLTEKSDVYSFGVVLLELISGKKPVSPEDYGPEVNIVHWARSLIRKGDIISIMDPLLIGNVKTESIWRVAEIAMQCVESHGASRPRMQEVILAIQDASKIEKGTENQLKISSSGDSKPQSSRKTLLTSFLEIESPDLSNGCLPSAR 929
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02055 929 SUPERFAMILY Protein kinase-like (PK-like) 594 874 IPR011009 -
Car05g02055 929 SMART serkin_6 607 882 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02055 929 ProSitePatterns Protein kinases ATP-binding region signature. 613 635 IPR017441 GO:0005524
Car05g02055 929 Pfam Malectin-like domain 28 362 IPR024788 -
Car05g02055 929 PANTHER - 13 894 - -
Car05g02055 929 PANTHER OS07G0107800 PROTEIN-RELATED 13 894 - -
Car05g02055 929 Gene3D Phosphorylase Kinase; domain 1 587 682 - -
Car05g02055 929 Gene3D Transferase(Phosphotransferase) domain 1 683 900 - -
Car05g02055 929 MobiDBLite consensus disorder prediction 562 584 - -
Car05g02055 929 ProSiteProfiles Protein kinase domain profile. 607 883 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02055 929 SUPERFAMILY L domain-like 398 505 - -
Car05g02055 929 ProSitePatterns Serine/Threonine protein kinases active-site signature. 728 740 IPR008271 GO:0004672|GO:0006468
Car05g02055 929 Gene3D Ribonuclease Inhibitor 368 515 IPR032675 -
Car05g02055 929 Pfam Protein tyrosine and serine/threonine kinase 609 874 IPR001245 GO:0004672|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02055 Car-Chr5 65808999 65814769 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02055 9 929 Receptor kinase-like Gene Family AT1G67720 69.364 0.0 1286
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-I-1 Car05g02055 Malectin_like 1.1e-88 CL0202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02055 - - gmx:100807148 1588.55