Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02048 ATGTATCTATCATCCGAAAAGCCTCGTCCAATCGATTTCTACAAAGAAGAAGCAAGAGACATGATGATGGAAGTAGTAACCAGCAGCGATCTTccaccgccgccgccaccacaccaccaccaaccacaaccGCAAATGATTCTAAACGCCGAGAGCAGCGGGGAAGATCCTGAGATGGAGATCAAAGCACCGAAGAAACGAGCAGAGACTTGGGTACAAGATGAGACACGAAGCCTCATTGGTCTACGACGCGAGATGGATTCGCTTTTCAACACTTCGAAGTCGAATAAACATCTCTGGGAACAGATTTCGGCGAAGATGAGGGAGAAGGGTTTCGATCGGTCTCCGACGATGTGTACTGATAAGTGGAGGAATCTTTTGAAAGAATTCAAGAAAGCAAAGCATCAAGATAGAGGAGGGAGTGGTTCTGCGAAGATGTCTTGTTATAAAGAGATTGATGAGATCTTAAGAGAGAGGAATAAATGTACGCAGCAGTATAAGAGTCCTACACCTACCTCCAAAGTTGAATCTTACATGCAGTTTTCTGATAAAGGTATTGATGATGCCAACATTTCTTTTGGGCCTGTTGAAGCTTCCGGAAGACCAACACTCAATCTCGAGAGAGGTTTGGATCATGATGGGCATCCTCTTGCCATTGCGGCAGATGCTGTTGCAGCAAGTGGAGTCCCTCCTTGGAATTGGAGAGAAACTCCCGGAAATGGTGGCGAAAGTCAGTCTTGTTGTGGAAGGGTTATATCAGTCAAATGGGGCGATTATACAAGACGGATAGGTATTGACGGGACTCCGGAAGCCATCAAGGAGGCAATTAGGGCTGCTTTTAGGTTGAGAACTAAACGTGCATTTTGGTTGGAGGACGAGGAACAGATTATCCGAAGTATTGATCGTGAGATGCCTATAGGAAATTACACTCTTCACCTTGATGAAGGAATGGCCATTAAAGTATGCCTATATGATGAGTCTGATCATATCCCTGTGCATACTGAAGATAAGATATTTTACACCGAAGATGATTACCGTGATTTTCTGGCACGCAGAGCTTGGACATGTCTTAGAGAATTTGACGGCTATAGAAATATTGACAATATGGATGATCTTCGACCTGGTGCCATATACCGGGGTGTGAGTTGA 1149 0.4273 MYLSSEKPRPIDFYKEEARDMMMEVVTSSDLPPPPPPHHHQPQPQMILNAESSGEDPEMEIKAPKKRAETWVQDETRSLIGLRREMDSLFNTSKSNKHLWEQISAKMREKGFDRSPTMCTDKWRNLLKEFKKAKHQDRGGSGSAKMSCYKEIDEILRERNKCTQQYKSPTPTSKVESYMQFSDKGIDDANISFGPVEASGRPTLNLERGLDHDGHPLAIAADAVAASGVPPWNWRETPGNGGESQSCCGRVISVKWGDYTRRIGIDGTPEAIKEAIRAAFRLRTKRAFWLEDEEQIIRSIDREMPIGNYTLHLDEGMAIKVCLYDESDHIPVHTEDKIFYTEDDYRDFLARRAWTCLREFDGYRNIDNMDDLRPGAIYRGVS 382
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02048 382 PANTHER - 6 381 - -
Car05g02048 382 ProSiteProfiles Myb-like domain profile. 63 127 IPR001005 -
Car05g02048 382 Gene3D - 71 133 - -
Car05g02048 382 PANTHER TRIHELIX TRANSCRIPTION FACTOR GT-4 6 381 - -
Car05g02048 382 SMART sant 67 129 IPR001005 -
Car05g02048 382 CDD GT1 69 134 - -
Car05g02048 382 MobiDBLite consensus disorder prediction 27 55 - -
Car05g02048 382 Pfam Myb/SANT-like DNA-binding domain 70 155 IPR044822 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02048 Car-Chr5 65732831 65738391 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02048 21 381 Trihelix Transcription Factor Family AT3G25990 68.937 0.0 516
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF Trihelix Car05g02048 Myb_DNA-bind_4 9.6e-20 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02048 - - ccaj:109807736 671.389