LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Car05g02042	ATGAAAGAGGAAATCAAATCCGAATTCAAAAAAGCAGGGTTCGATCTCGACGAAGAAGAAGAGATTCTGAGTAAATGTCTCACTTTTTGCATCAACTACAGTCTCACTCCTTCCGATCTCGTCTCAAGCTGGGAAGTTTATTACCTTAATAGGCAGCTGAATGAACCAACGGTTGAAAATGCTGAAATGGAAGGCTTTCTCATTCATCTACAAAATATTACGAAAGAAGATATTATAAAGGAAGAAACTGGTTTGCATCTTTATTCTATCAAAGATGTAGAAATGATCTTAAATAATGTTGATGATGATATAAAGGATGATACTCCCAGTACACCAACAAATCATCATCAAAATGTTTATTCTCCTACACATGATACACCGTCTTTGTACGGGAATGTTTTAGCTTCTGGAAAACCAGCAAATCTGGTGACACCTTTCTCAAAGCGAAAAGATAGGTTTGCGGTGAAATTCAGCATCAACACCATGCCTGATGTAGAAAATGGAAGACAAGAACTTAATCATGAGAATGCAGAGAATGACGAGTACAGTATTGTTACGAGAGTCCAAACCCGGAAAAGATGTTCATTGGTGTTTCATGGATCAGGGCCTAAACCAGGTTGCAGATTCATGTATGATAGGACGGAGGATAGGATTAACGCAATAGAAAGCCGAATTAGAAAACATGCAAGAGCACTTGTAGCTTCTGGGCTCTATGAAGAACCAACAGACCCTACAGTTGCCTCACCTAGAAGCATTTTTGCCGTTGGCATGATTTGTTGTGATGGAGAAGGTCGTCTCAATGAGAAATCTGTAATGTTGCAGAGCAGTATTGAGCATTCGGGAGGGGAATGTGTCCGCCTAGACTTACAACGTTTAAGTCATTTTTCAGTTTTCCCTGGCCAGGTAGTTGGAATTGGAGGGCATAATCCCAGTGGGCATTGCCTTGTTGCATCTAAATTGGTGGACTGTGTACCTACCCCTGTTGCTAACGAGGATTTTAATCCTTCAAAGAAGCTAGCTATTGATAAGGAGAATCCGCCAACTGATCTTCTTTGTAATCAGAGAGAATTATCAATGATTATTGCGGCTGGCCCTTTTACTACAACCGACAATTTGTTGTTTGAGCCTCTTGTAGAACTGCTGGCATATGCAAAGCGAAGACCGCCACAGTTACTTGTATTGCTGGGACCATTCATTGACTCTGAACACCCGGACATCAAGAAAGGAACCGTAGACATGGTTTTTAATGACATATTTCGTTTTGAAGTCTTGAAGAAGGTAATAACTTTAGTAGGATATGTTTCTGGAGTTTACTTTTCAGTGCGTGTTCTCCTTGTACCATCTATACGGGACGCTAACCATGATTTTGTTTTTCCTCAGATATCCAGTCTCACTAATCCTGGAATCTTTGAGGCAAATGAGGTCAAAGTTGGTTGCTGCACTTTGGATGTTCTCAAGCAGATCAGTGGGGAGGAGATATCACGAATTGCAGCAGATGGGAAGCCTATTGATCGCCTGAGTAGACTTACAAACCATATTCTTAATCAGCAAAGTTTCTATCCACTTTACCCACCCGCAGAAAGTGTTCCCTTGGACTTTTCTCTGACGCCAGAAACTCTTCAACTCTCATTGGTTCCAGATGTCCTTATCTTACCTTCGGACATCAAGTACTTTGTCAAGGTTCTTAATAAAGAAAGCGACGAGATAAATGGCATGAAATGCATTGCCGTTAATCCGGGAAGATTAGCCAAAGGAGAAGGAGGAGGTACTTTTGTAGAGCTTGATTACAGTGGGGGTCCCGACAAATTTAACGTTTCAATTATGGGCATATGA	1833	0.4103	MKEEIKSEFKKAGFDLDEEEEILSKCLTFCINYSLTPSDLVSSWEVYYLNRQLNEPTVENAEMEGFLIHLQNITKEDIIKEETGLHLYSIKDVEMILNNVDDDIKDDTPSTPTNHHQNVYSPTHDTPSLYGNVLASGKPANLVTPFSKRKDRFAVKFSINTMPDVENGRQELNHENAENDEYSIVTRVQTRKRCSLVFHGSGPKPGCRFMYDRTEDRINAIESRIRKHARALVASGLYEEPTDPTVASPRSIFAVGMICCDGEGRLNEKSVMLQSSIEHSGGECVRLDLQRLSHFSVFPGQVVGIGGHNPSGHCLVASKLVDCVPTPVANEDFNPSKKLAIDKENPPTDLLCNQRELSMIIAAGPFTTTDNLLFEPLVELLAYAKRRPPQLLVLLGPFIDSEHPDIKKGTVDMVFNDIFRFEVLKKVITLVGYVSGVYFSVRVLLVPSIRDANHDFVFPQISSLTNPGIFEANEVKVGCCTLDVLKQISGEEISRIAADGKPIDRLSRLTNHILNQQSFYPLYPPAESVPLDFSLTPETLQLSLVPDVLILPSDIKYFVKVLNKESDEINGMKCIAVNPGRLAKGEGGGTFVELDYSGGPDKFNVSIMGI	610

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Car05g02042	610	PIRSF	DNA_pol_alpha_2	1	600	IPR016722	-
	Car05g02042	610	Pfam	DNA polymerase alpha/epsilon subunit B	360	560	IPR007185	GO:0003677\|GO:0006260
	Car05g02042	610	Gene3D	-	342	494	-	-
	Car05g02042	610	Gene3D	-	500	604	-	-
	Car05g02042	610	Gene3D	-	1	64	IPR043034	-
	Car05g02042	610	Coils	Coil	211	231	-	-
	Car05g02042	610	PANTHER	DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT	1	599	IPR016722	-

Functional genes information

Select	Gene	Gene_start	Gene_end	Function	Ath_gene	Identity(%)	E-value	Score
	Car05g02042	3	610	Core DNA Replication Machinery Family	AT1G67630	58.599	0.0	717

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Car05g02042	K02321		-	gmx:100795306	928.702