Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02035 ATGGATCCTTCTATGGTGTCTGAGTCAGTTCAGGATGCTGATTCCGAGTCTCTTATAGGTTTACATTCAATGTTGCCAGAGCAGGGGTTGGTTAATAAGCGGGGAGCTGAGCAACCAGAAGTTGAAGATCATGTTCCAACCCGTAATATATCATCTTCAAGATGGGCAGCTGGAGATGACTCTCCTGACGATGAAGGTGACAACAAGGAAATTTTTAAAAGGAAGAGGATTTCTCCTGAGTGGGGTGTGAGAGCAAGAAACAAGATGTTGAGATCAGAGGAATCTAAAATTGAAGGTTTTGGAAGGGCTAGAACCAAATCATCTGAATCTGAAGAAAGAGGTAGCTCTGGGAGATATTCTGGCGACGAGGAACATCCTGGTGTCAAGGAAGAGAAATATAACTACATGGAGATTGATGGCGGAGTTTGCAGAAGTGATACCAGTGGTAGTCACACTAATACTGATTCTGAACGTGAAGATGATTGCAGGGAAAGTATGGAACCTTCGGCTCCACCACACAGAGTTGTCAACATGCTTCAAGGTTGTAGAAGCGTTGACGAGTTTGAGAGATTGAACAAGATTGATGAAGGAACATATGGTGTTGTATTTAGGGCCAAAGACAAGAAGACTGGCGAAATAGTGGCATTGAAAAAGGTGAAGATGGAGAAGGAAAAAGAAGGCTTTCCACTGACTTCACTTAGGGAAATAAACATACTTCTTTCCTTTCATCATCCATTCATAGTTGACGTTAAAGAAGTAGTGGTAGGTAGTAGCCTTGATAGTATTTTTATGGTTATGGAATACATGGAACACGATCTTAAAGGACTCATGGAGGCAATGAAGCAGCCATTTAGCCAGAGTGAAGTAAAATGCTTAATGCTCCAGCTGTTAGAAGGTGTGAAGTATCTTCATGACAACTGGGTGCTTCACAGGGATTTGAAGACTTCAAATCTGCTGATGAATAATAGGGGTGAGTTAAAAATTTGTGATTTTGGATTAGCTCGTCAATATGGGAGTCCGTTGAAACCATATACATCTTTGGTGGTTACTCTTTGGTACAGGGCTCCTGAAATTCTTTTAGGGATAAAGCAGTATTCAACAGCCATTGACATGTGGTCTCTGGGTTGTATAATGGCTGAGCTACTATCCAAGGAACCATTATTTAATGGGAGGAGTGAATTTGATCAACTTGACAAGATTTTCAGAATTCTCAGCACCCCAAATGAAACAATTTGGCCCGGGTTCTCAAAATTACCTCGAGTCAAGGTCAATTATGTCAAGCATCAGTATAATCTCCTAAGGAAGAAGTTTCCTGCAACGTCATTCACTGGATCCCCAGTTCTTTCTGATTCTGGATTTGATTTGTTGAACAGGCTTCTCACTTATGACCCTGAAAAGAGGATCACTGCTGAAGAGGCTCTCAACCATGAGTGGTTTCGTGAAGTTCCCCTTCCCAAATCTAAAGAATTCATGCCTACATTCCCTGCTCAACATGATCATGACAGGCGAATGCGAAGAATAAAGAAGAGTCCACATCCATTAGAGGAGAAGCACCGGAAGGGGTTGCAGCTGGTTGAATCAGAAACTGATTTATTTCAGGTTAACCTACACTGTCGATCATCATATAGAAATGCATATGGGAACAGGACACTGCTGGCAGCATAA 1665 0.4186 MDPSMVSESVQDADSESLIGLHSMLPEQGLVNKRGAEQPEVEDHVPTRNISSSRWAAGDDSPDDEGDNKEIFKRKRISPEWGVRARNKMLRSEESKIEGFGRARTKSSESEERGSSGRYSGDEEHPGVKEEKYNYMEIDGGVCRSDTSGSHTNTDSEREDDCRESMEPSAPPHRVVNMLQGCRSVDEFERLNKIDEGTYGVVFRAKDKKTGEIVALKKVKMEKEKEGFPLTSLREINILLSFHHPFIVDVKEVVVGSSLDSIFMVMEYMEHDLKGLMEAMKQPFSQSEVKCLMLQLLEGVKYLHDNWVLHRDLKTSNLLMNNRGELKICDFGLARQYGSPLKPYTSLVVTLWYRAPEILLGIKQYSTAIDMWSLGCIMAELLSKEPLFNGRSEFDQLDKIFRILSTPNETIWPGFSKLPRVKVNYVKHQYNLLRKKFPATSFTGSPVLSDSGFDLLNRLLTYDPEKRITAEEALNHEWFREVPLPKSKEFMPTFPAQHDHDRRMRRIKKSPHPLEEKHRKGLQLVESETDLFQVNLHCRSSYRNAYGNRTLLAA 554
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02035 554 MobiDBLite consensus disorder prediction 58 137 - -
Car05g02035 554 PANTHER - 49 529 - -
Car05g02035 554 Pfam Protein kinase domain 188 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02035 554 PANTHER CELL DIVISION PROTEIN KINASE 49 529 - -
Car05g02035 554 CDD STKc_CDC2L1 182 479 IPR045267 GO:0004674|GO:0005524|GO:0006468
Car05g02035 554 Gene3D Phosphorylase Kinase; domain 1 173 270 - -
Car05g02035 554 MobiDBLite consensus disorder prediction 151 168 - -
Car05g02035 554 ProSitePatterns Serine/Threonine protein kinases active-site signature. 308 320 IPR008271 GO:0004672|GO:0006468
Car05g02035 554 SMART serkin_6 188 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02035 554 MobiDBLite consensus disorder prediction 1 16 - -
Car05g02035 554 SUPERFAMILY Protein kinase-like (PK-like) 180 485 IPR011009 -
Car05g02035 554 ProSiteProfiles Protein kinase domain profile. 188 479 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g02035 554 Gene3D Transferase(Phosphotransferase) domain 1 271 515 - -
Car05g02035 554 MobiDBLite consensus disorder prediction 1 172 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g02035 Car-Chr5 65628222 65631034 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02035 179 506 Core Cell Cycle Gene Families AT5G10270 44.898 8.06e-94 294
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_CDK-PITSLRE Car05g02035 Pkinase 4.6e-75 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02035 K08818 - gmx:100793729 835.099