Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g02020 ATGGTTGTGGTTATGGCAGAGGAAGAAGAGAAAACGTTGTCGATTGAACCAGAATTTCCAAGGAGTAGAGTGAAGAAGATAATGACTCTTGATGAGGACGTGAAGAGAGTGAGTTCAGAAGCGTTGTTTCTGGTGTCGCGTTCTACGGAACTGTTTCTACATTTACTTGCTGAAAAGTCTGCACAAGTTGCGATTGAGAAGAAACGCAAGACGGTGAAGCTTGAACACATTAGAATCGCGGTGAAGAGGCATCGGCCGATAAGTGATTTTCTTCTCGATTCGCTTCCGATGCCTTCTGAAACTGTTAAATCCGATAAACCTGTGCAGGATGCTGATCGGCCTAAATCTGTTCCGGATGGTACTCGCCGTATTGATCATATCTTCCGAAAGTCAGAAGCCCAGGCCCAAGTTGAAGCTCAAGAACCCGAACCTGAACCCATGGAGGAGTCCTAG 453 0.4614 MVVVMAEEEEKTLSIEPEFPRSRVKKIMTLDEDVKRVSSEALFLVSRSTELFLHLLAEKSAQVAIEKKRKTVKLEHIRIAVKRHRPISDFLLDSLPMPSETVKSDKPVQDADRPKSVPDGTRRIDHIFRKSEAQAQVEAQEPEPEPMEES 150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g02020 150 MobiDBLite consensus disorder prediction 92 123 - -
Car05g02020 150 MobiDBLite consensus disorder prediction 105 123 - -
Car05g02020 150 Pfam Histone-like transcription factor (CBF/NF-Y) and archaeal histone 18 81 IPR003958 -
Car05g02020 150 PANTHER NUCLEAR FACTOR Y, SUBUNIT C13 7 132 - -
Car05g02020 150 PANTHER HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 7 132 - -
Car05g02020 150 SUPERFAMILY Histone-fold 17 84 IPR009072 GO:0046982
Car05g02020 150 Gene3D Histone, subunit A 2 97 IPR009072 GO:0046982
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g02020 7 135 CCAAT-HAP5 Transcription Factor Family AT5G43250 62.016 1.75e-48 150
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF NF-YC Car05g02020 CBFD_NFYB_HMF 3.8e-19 CL0012
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g02020 - - gmx:100790556 179.489