Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01999 ATGTGGGGTAAGATGTTGAAATTGAAATTCTTGGGGAACATCTGCTGTATTCAGCAAAGGGATCAAGTTGATAGTACTGTGATGTGGTCAAATTGCAATGTTTGTATAGAGGAAAACAAACAATGCAATGGTGACCACATCATTGTTGAGGATCGAAATAACACTAATACTACAGAAGACAGCGCCAATATCGACACCAAGCATGATGCTAATGCTGATTGTTCTTTTGTTCATGCTGTCATCAACATGGTGGGAATGCTCATAGGTTTGGGGCAACTATCAACTCCTTATGCTATTGAAAAAGGAGGGTGGTTATCTGTATTATTGCTTATAGGACTTGGCCTAATGTGTACTTACACCTCTCATATACTTGGAAAATGCCTTGAAAAGAATCCAAAGTTAACAAGTTATGTGGATATTGGGAATCAAGCATTTGGATCAAAAGGAAGATACCTAGTTGCAACATTAATCTACATGGACATATTCATGGCACTTGTTTCCTACACAATCTCATTACATGATAACTTGATCACTGTATTTATAGGGACACGTTTGAATCTACAACTGGCTAAGTTAAAAACATCACAGCTTCTAACAGTGGTGGCAGTTTTGATTGCTCTGCCTAGTTTATGGATCAGAGATATGTCTTCTATATCTTTCCTTTCAAGTGGTGGTATTATTATGTCTCTTCTCACATTTGTGTGTGTAGTGGCCACTGCAATTTTTGGAGGTTTTCAAGCTAGTAATCATAGTATACCTGTCTTCAAGCCACATAATATTCCATCAATATCTGGTCTGTATATTTTTACTTATGGAGGACACATTGTTTTCCCTGATTTATATAAAGCAATGAAAGACCCCTCTAAATTCACCAAGGTTTCAATTGTGAGCTTCACAATAGTAACGGCACTTAACACCTCAATGGGGTTCATGGGTGCCAAAATGTTTGGAAATGATGTGAAGTCTCAAATAACTCTGAGCATGCCACCAAAGAAAATCATAACAAAGATTGCAGTTTGGGCAACCGTGTTGACACCAATGACCAAATATGCCCTTGAATTTGCACCCTTCGCAATTCAGCTTGAGCATGCACTTCCAAATTCTTTTAGTGGAAGGACAAAATTGGTAATCAGGGGTTTTGTGGCTTCATTATTGCTCTTGTTCATACTAACCGTTGCTCTATCAGTGCCATATTTTGAACATGTACTCAGCCTCACTGGTTCACTAGTTAGTGTAGCCATTTGTTTGATTTTTCCATGTGTTTTCTATATGAAGATTTGTTGGGGTAAAATAACAAGGCCTCTCTTAGTTCTTAATATTTTTTTAGTCATATTTGGGTTTCTTCTTGGAGTGATGGGTACCATTTCCTCTACAAAGTTAATATTGGAAAATTTTCTATCACATCATTCAACTTGA 1416 0.3729 MWGKMLKLKFLGNICCIQQRDQVDSTVMWSNCNVCIEENKQCNGDHIIVEDRNNTNTTEDSANIDTKHDANADCSFVHAVINMVGMLIGLGQLSTPYAIEKGGWLSVLLLIGLGLMCTYTSHILGKCLEKNPKLTSYVDIGNQAFGSKGRYLVATLIYMDIFMALVSYTISLHDNLITVFIGTRLNLQLAKLKTSQLLTVVAVLIALPSLWIRDMSSISFLSSGGIIMSLLTFVCVVATAIFGGFQASNHSIPVFKPHNIPSISGLYIFTYGGHIVFPDLYKAMKDPSKFTKVSIVSFTIVTALNTSMGFMGAKMFGNDVKSQITLSMPPKKIITKIAVWATVLTPMTKYALEFAPFAIQLEHALPNSFSGRTKLVIRGFVASLLLLFILTVALSVPYFEHVLSLTGSLVSVAICLIFPCVFYMKICWGKITRPLLVLNIFLVIFGFLLGVMGTISSTKLILENFLSHHST 471
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01999 471 Pfam Transmembrane amino acid transporter protein 75 455 IPR013057 -
Car05g01999 471 PANTHER AMINO ACID TRANSPORTER AVT1H 57 467 - -
Car05g01999 471 PANTHER OS05G0424000 PROTEIN-RELATED 57 467 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01999 Car-Chr5 65294752 65297036 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01999 32 469 Amino Acid or Auxin Permease AAAP Family AT5G16740 57.370 2.30e-166 474
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01999 - - lang:109342470 666.381