Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01953 atGGCGAAGAAACGGGTCCCCGATTGGCTCAACAGTCCTCTCTGGTCCTCCCCCTCCGAACGTTTCTCCGCCGTTTCTTACCCACCGGAACCTCCCTCTCCACCTCCCGTACCTATTGAAGAACCTCCTCCCCCAATTCAACATTCGCGAATCAATCACAATGCCGTTGACACTTCAcctccctcttcctcgtcttcctcctccgtttctacttcctccgccGATGACATGTCCCTATCCCGTCAGGTCCAGTCCCAGGCCCAATTGTTAACCGAGTTATCTAGGAAAGTCATAGATATGAGGGAATTAAGGAGAATTGCATCTCAAGGGATACCCGATGTTCCTGGTTTACGTTCTACTATATGGAAGCTTTTACTAGGGTATCTTCCACCCGATCGAGCCCTTTGGTCCTCTGAATTAGCAAAGAAGAGGTCCCAATACAAACGTTTCAAACAAGACATTCTCATCAATCCTTCAGAAATCACGAGGAGGATGTGCAATGCTGCTAATTATGATGCTGACGATGTCAAATGTGAGACAAGGGGCATGCTTTCTAGATCACAAATTACTCACGAGGAACATCCTTTGAGTCTTGGCAAGACCAGCATATGGAATCAGTTTTTCCAGGACACCGATATCATAGAACAGATTGACCGCGATGTAAAGCGTACTCATCCAGATATGCACTTCTTCTGTGGTGATTCTCAATTAGCAAAATCTAATCAGGAGGCTTTAAAGAACATATTAATTATTTTTGCAAAGTTGAACCCAGGTATAAGATATGTTCAAGGGATGAATGAAGTATTGGCTCCTTTATTCTACGTGTTAAAAAATGATCCTGATGAGGAAAATGCAGCCTTTGCTGAAGCCGACACATTCTTTTGTTTTGTTGAACTATTGAGTGGATTCCGAGATAATTTTTGTCAACAACTTGACAATAGTGTTGTTGGAATTCGTTCGACTATAACAAGATTGTCTCAGCTTTTGAAAGAACACGATGAAGAACTATGGCGCCATCTTGAGGTCACAACCAAAGTCAACCCCCAATTTTATGCATTTAGGTGGATTACTCTCCTCTTGACTCAGGAATTCAAATTTTCAGACAGCCTTCGTATTTGGGACACCCTTTTAAGTGACCCTGAGGGTACACAGGAGACACTTCTTCGGATATGCTGCGCAATGCTAATTCTCATGCGTCGGCGCCTCCTGGCGGGTTTCAACGTCGCATTTCAATTTTATGTTTGTAAATTACTCTGTAAATGTTGGTTCAGAGCAGCAATTCGTATTGTTTTAGATTCATTTTTTTTCGTTTCTAAATTTTTTGTTTATTGTGCTCCACCACATACTGTTTCAGATGGTTTATGGGGTGGCCAAAAAAGTGGCAGGACTCCAATGAAATCTTTCTTCCCCCTGTTTGAGTTGCAAGTGCTTATCATTTTTGTACTCACCCAAATATGTTGTTTCCTTCTCAAACCCTTGAAACTCCCTCAATTCATTTCCCAAATGATGGCTGGTGTGATTCTAGGTGCTTTATTTCATCTAAAGACAGTGGACACATACATGGACAAATTATTCCCATATGGAACTCATGACGTCATTTCATCAATTTCATCAATTGGTTTTGTAATCTTCATTTTCATAAATGGTGTTCAAATGGATTTCAGCATGATAACAAGGACAGGAAACAAAGCATGGACAATTGCCATAGTTGGATTAGTAGTACCATTATTTGTTGGTTTTGCACCAATACTCACATTCCCTGAAAAACTAGTAGCCATTGAAAAAGCCAATGGCCAGGGAATTTACGTTGCATTAGTATCACATATTATAAGTTCATTTGCTGTTATTGCTTCTTGCGTAAGTGAACTTCAAATCCAAAACTCTGAGCTTGGTAGATTGGCATTGTCATCAGCTTTGGTTTCTGACATATTGAGTACTATCATGACAACAACTGGTGTTACTATTGTGAGTACTCCTGATATGGAAGTTGTTTCAAGAAACTTGTTCTCACTTTTCACACTTGCTGTGTTTATTCCATTAATATGTAGGCCAATAATGTTTTGGATCATCAAACATACACCTGAAGGAAGACCTGTTGAAGAGGGTTATATTTATGTTATCATTGCTATGGTTTTTGGTTTAGGTGTTTTTACAGTTAAGATTGATCAACAATTTGTATTAGGAGCTTTCATTTTGGGATTGTCTGTGCCAGAAGGACCTCCTTTAGGATCTGCATTGGTTAAGAAGCTTCAATTCTTCGGTACATCGTTCTTTTTGCCCATTTTTGTGACTACTTCTGTGTTGAAGGCAGATTTTTTCATAGATTTTTCATCATCTGTTGTGGTGTCTGTTGGTATGGTGGTGCTTTTTATTCACTTGGTCAAAATAGCAGCATGTTTTGTAACTGCACTCTGTTGCAATATGCCTGTCACTGATGCTTTGTCACTTTCGCTTATTTTGAACACCAAAGGCGTCGTGGAAATCGGCATCTACAATTCCTTATACGACAATAATATTGTTGATGGCCAAACATATGGAATATTGATGATAAGTATAATGATCATAGCAACCATTGTGCAATGGACGGTGAAGTTATTATATGATCCTTCAAGAAAATATGCAGGCTACCAAAAAAGGAACATGATGAGCTTAAAACACCACTCAGATCTAAGAATACTATTAACTATTCACAAACCAAACCACATTTCAGCAGCAACAGATTTCCTAGACCTATGTTGTCCAACACATGAGAATCCCATCACAGTTGATGTACTTCATCTAATTGAGCTAGTTGGAAGAGCATTACCAGTTTTCATTCCTCATTGTCTTCAAAGACAAGCATCACTATCCGCTTCACACAAATCATACTCAGACGATGTCATCGTTGCTTTCGATATCTATGAGCACAACAATCCACATGCTGCATCAGTTTACACTTACACGGCTATATCTCCATCAAATCTCATGTTTGAAGATGTTTGCAACCTTGCATTGGACAAAGTTGCATCCATGATAATTCTTCCATTTCATATAAGATGGTCTAGTGATGGTGTAGTTGAATCTGATGACAAGAAAACATTAAGAGCAATGAATCACAGAGTTCTTGAAATAGCTCCATGTTCTGTTGGAATCCTCGTAACACGCGCTAATtcaaaacaaacaggaacatccaccatatcatcgacatcatcatcaacaacaGAATATTCCAGTACTACTCGATTAGCTGTCATTTATATCGGTGGAGCTGACGACGATGAAGAGATTTTATGCTTAGCAAAACGTACGATGAATAACCCGAGGATCAACCTAGTTGTTTACCACCTTGTTGCTAAAGATTGCATGGCAGAATTGGAAGATTTAATGGTAATTGGAGATGAAATGTTACAAGAAGTGAAGCATGCAGAAAATGTGAGGTATCAAGAGATATTCACAAAAGATGGATCACAAACAGCTTGTTTTCTACGTGAAATAGTGAATGAACATGATTTTTTTATAGTTGGAAGAAGACATGGAATTCATTCTCCTCAAACTGAGGGACTAACTGAATGGAGTGAATTTCCTGAACTTGGTGCTATTGGTGATTTTCTTTCTTCACCTGATCTTAATAGTCGTGCATCTGTTTTGGTTGTGCAGCAACAACTCTCTATCAAAACGGAATTGAAAGGAGCAGAAAGCCACAGTGGCCGTCGATCTGACCCAGACCCAAACCAAGTGGATGCGtcttttcctccttcctcttcattttgttcttcttattctctctcttcACGCTCAAATCCTCTCAAACTGAAACCTAGCGCCACCTTTAAACTCCGATTCCGGCAGCCACAGATCTCATCTCCCAATATTAAACCGATTAAAGTGTCTCTTATTATCTCTTATTATCTCTTATTCAAAATACCTCAATTAATTTTCGGTTCTGTTATGGAGGAGCAATTCATACTTAGAGTTCCACCTAACATTGCGGAGCGGATAGAGCGTCTTCTGAATGAAAACAATGCTTCTTCATCTGAAGACAAGTCGCTAGATTTGCAATTTAGTGAGGATGGAAGAAGCGGTACGTTTATGATTGGAAATGAGCACTTCCCGGCTGCTCTACTGGACCTTCCTTCTGTCGTTGAATCATACAAGACTTATGACGATAACTCTTTGGTTAAGACTGCTGATATTGGTCAGATGATTATGGTGAGGGAATCTGGTGATGTTGCTCCAGATGTAATCGAGTGCAGACATGGCCTTACCCCTCCCATGAGAGATGCCCGCAAGCGTAGATTCCGCCGAGAGCCTGACCTTAATCCTGAGCTTGTCTCCCGTGTTGAGAAAGATCTTCTCAAAATCATTGCTGGAGGAACGGTTGACAATCTTGATGTGGAAATAGCTGAGCAAGAAGGTGACGAGAATGCTCGAGGTGCTAATAAAAAACCTGCAGCTGCACCTGTATCAAAGCATGATGTTCCGGAGCCTCTTACAAACGCTGGGGATCCTGACAGAAGTGACTCTGATGAATCTGATGACTCAGTTTGA 4527 0.3899 MAKKRVPDWLNSPLWSSPSERFSAVSYPPEPPSPPPVPIEEPPPPIQHSRINHNAVDTSPPSSSSSSSVSTSSADDMSLSRQVQSQAQLLTELSRKVIDMRELRRIASQGIPDVPGLRSTIWKLLLGYLPPDRALWSSELAKKRSQYKRFKQDILINPSEITRRMCNAANYDADDVKCETRGMLSRSQITHEEHPLSLGKTSIWNQFFQDTDIIEQIDRDVKRTHPDMHFFCGDSQLAKSNQEALKNILIIFAKLNPGIRYVQGMNEVLAPLFYVLKNDPDEENAAFAEADTFFCFVELLSGFRDNFCQQLDNSVVGIRSTITRLSQLLKEHDEELWRHLEVTTKVNPQFYAFRWITLLLTQEFKFSDSLRIWDTLLSDPEGTQETLLRICCAMLILMRRRLLAGFNVAFQFYVCKLLCKCWFRAAIRIVLDSFFFVSKFFVYCAPPHTVSDGLWGGQKSGRTPMKSFFPLFELQVLIIFVLTQICCFLLKPLKLPQFISQMMAGVILGALFHLKTVDTYMDKLFPYGTHDVISSISSIGFVIFIFINGVQMDFSMITRTGNKAWTIAIVGLVVPLFVGFAPILTFPEKLVAIEKANGQGIYVALVSHIISSFAVIASCVSELQIQNSELGRLALSSALVSDILSTIMTTTGVTIVSTPDMEVVSRNLFSLFTLAVFIPLICRPIMFWIIKHTPEGRPVEEGYIYVIIAMVFGLGVFTVKIDQQFVLGAFILGLSVPEGPPLGSALVKKLQFFGTSFFLPIFVTTSVLKADFFIDFSSSVVVSVGMVVLFIHLVKIAACFVTALCCNMPVTDALSLSLILNTKGVVEIGIYNSLYDNNIVDGQTYGILMISIMIIATIVQWTVKLLYDPSRKYAGYQKRNMMSLKHHSDLRILLTIHKPNHISAATDFLDLCCPTHENPITVDVLHLIELVGRALPVFIPHCLQRQASLSASHKSYSDDVIVAFDIYEHNNPHAASVYTYTAISPSNLMFEDVCNLALDKVASMIILPFHIRWSSDGVVESDDKKTLRAMNHRVLEIAPCSVGILVTRANSKQTGTSTISSTSSSTTEYSSTTRLAVIYIGGADDDEEILCLAKRTMNNPRINLVVYHLVAKDCMAELEDLMVIGDEMLQEVKHAENVRYQEIFTKDGSQTACFLREIVNEHDFFIVGRRHGIHSPQTEGLTEWSEFPELGAIGDFLSSPDLNSRASVLVVQQQLSIKTELKGAESHSGRRSDPDPNQVDASFPPSSSFCSSYSLSSRSNPLKLKPSATFKLRFRQPQISSPNIKPIKVSLIISYYLLFKIPQLIFGSVMEEQFILRVPPNIAERIERLLNENNASSSEDKSLDLQFSEDGRSGTFMIGNEHFPAALLDLPSVVESYKTYDDNSLVKTADIGQMIMVRESGDVAPDVIECRHGLTPPMRDARKRRFRREPDLNPELVSRVEKDLLKIIAGGTVDNLDVEIAEQEGDENARGANKKPAAAPVSKHDVPEPLTNAGDPDRSDSDESDDSV 1508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01953 1508 Gene3D - 472 874 IPR038770 -
Car05g01953 1508 PANTHER CATION/H + ANTIPORTER 436 1220 - -
Car05g01953 1508 MobiDBLite consensus disorder prediction 1461 1508 - -
Car05g01953 1508 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 317 405 IPR035969 -
Car05g01953 1508 MobiDBLite consensus disorder prediction 1 80 - -
Car05g01953 1508 Pfam TAFII55 protein conserved region 1310 1446 IPR006751 GO:0005669|GO:0006367
Car05g01953 1508 Gene3D - 316 439 - -
Car05g01953 1508 Gene3D putative rabgap domain of human tbc1 domain family member 14 like domains 198 308 - -
Car05g01953 1508 CDD TAF7 1311 1452 IPR006751 GO:0005669|GO:0006367
Car05g01953 1508 Pfam Rab-GTPase-TBC domain 210 401 IPR000195 -
Car05g01953 1508 Pfam Sodium/hydrogen exchanger family 478 859 IPR006153 GO:0006812|GO:0015299|GO:0016021|GO:0055085
Car05g01953 1508 MobiDBLite consensus disorder prediction 51 80 - -
Car05g01953 1508 Gene3D - 80 136 - -
Car05g01953 1508 SMART TAFII55_N_2 1310 1455 IPR006751 GO:0005669|GO:0006367
Car05g01953 1508 PANTHER CATION/H+ EXCHANGER 3 436 1220 - -
Car05g01953 1508 MobiDBLite consensus disorder prediction 25 45 - -
Car05g01953 1508 MobiDBLite consensus disorder prediction 1221 1245 - -
Car05g01953 1508 SUPERFAMILY Ypt/Rab-GAP domain of gyp1p 92 339 IPR035969 -
Car05g01953 1508 SMART tbc_4 107 406 IPR000195 -
Car05g01953 1508 ProSiteProfiles TBC/rab GAP domain profile. 112 380 IPR000195 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01953 Car-Chr5 64809101 64822605 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01953 446 1214 Antiporter Super Family AT5G22900 36.737 1.15e-146 468
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01953 - - cam:101512648 1464.13