Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01943 ATGGGAGAAGTACAAAGGGAGATTATAACATGGGagaaggaggaagaagaaaaagaagaagaagaagctcaagtagaaATATGGAAATACATATTTGGTTTTGTTGAATTAGCTGTGGTGAAATGTGCTATTCAACTTGGAATAGCTGAAGCCATTGAAAATCACAAAAAACCAATGTCACTATTAGAAATATCATCAACTCTAAATTGTGACCCTTCATATCTCAACCGCATCATGAGATTCCTAACACATAGGAAAATATTCAAAACAATACCTAGCGACCATAACGACAATCCTAGCTATGTTCAAACCCCACTTTCTCGCCGTTTGATTTCAAACAGCGAAAAAAGTATGTCTGCTCTCCTTTTATTAGAGAGCAGTCATGTAATGGTTGCACCTTGGCTTAGTCTAAGTGAACGCGTTTTGGTTAATGGAAATCCTTCGTTTGAGAAGGTTAACGGCGAAGATATTTGGCGCTTTGCTGCGACGAATCTTGATCATAGCAATCTAATTAATGATGCTATGGCTTGTGATGCTAGGGTTGTTGTGCCGGCTATTGTTGAAGGTTGTAGTGAGGTGTTTGATGGTGTTAATTCCTTAGTGGATGTTGGTGGAGGGAATGGTACTACCATTTCCATCCTTGCCAAGGCTTTTCCTAGGATTCAAAGATTAATCAACTTTGATCTTCCTCATGTTATTGTTGTGGCACCAAAGTGTGATAGAGTGGAACATGTGGCTGGTGATATGTTTACAAGTGTTCCCAAAGCTGATGTTGCATTTGTTAAGTGGGTTTTGCATGATTGGAGTGATGAAGAGTGCATCAATATCTTAAAGAGGTGNNNNNNNNNNTAG 852 0.3674 MGEVQREIITWEKEEEEKEEEEAQVEIWKYIFGFVELAVVKCAIQLGIAEAIENHKKPMSLLEISSTLNCDPSYLNRIMRFLTHRKIFKTIPSDHNDNPSYVQTPLSRRLISNSEKSMSALLLLESSHVMVAPWLSLSERVLVNGNPSFEKVNGEDIWRFAATNLDHSNLINDAMACDARVVVPAIVEGCSEVFDGVNSLVDVGGGNGTTISILAKAFPRIQRLINFDLPHVIVVAPKCDRVEHVAGDMFTSVPKADVAFVKWVLHDWSDEECINILKRXXXX 283
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01943 283 PANTHER 3'-HYDROXY-N-METHYL-(S)-COCLAURINE 4'-O-METHYLTRANSFERASE 2-LIKE 12 279 - -
Car05g01943 283 Gene3D - 9 110 IPR036388 -
Car05g01943 283 Gene3D Vaccinia Virus protein VP39 112 282 IPR029063 -
Car05g01943 283 Coils Coil 1 26 - -
Car05g01943 283 PANTHER O-METHYLTRANSFERASE 12 279 IPR016461 GO:0008168
Car05g01943 283 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 115 279 IPR029063 -
Car05g01943 283 SUPERFAMILY "Winged helix" DNA-binding domain 17 114 IPR036390 -
Car05g01943 283 Pfam Dimerisation domain 39 83 IPR012967 GO:0046983
Car05g01943 283 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 28 283 IPR016461 GO:0008168
Car05g01943 283 Pfam O-methyltransferase domain 134 279 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01943 Car-Chr5 64717927 64721656 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01943 40 278 Monolignol Biosynthesis Gene Families AT5G54160 35.887 9.29e-45 153
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01943 K22588 - gmx:100782951 355.14