Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01934 ATGGATGAGTTTTGGACTACTATGATATCTGATTTTGGGCTTGCAAAACTTCTAATGCCCGATCAAACCAGAACTTTCACGGTGATTAGAGGGACAAGAGGCTACATGGCGCCAGAATGGAACAAGAACACTCCAATATCACTGAAGGCAGATGTTTATAACTATGGAATAGTATTGTTGGAAACACTTTGTTGCAGAAGAAACCTTGATGTTAATGCGTTGGAACCAGAGGAGATTCTTCTCTCTGGTTGGGCTTATAGATGCTTTGTTGCAAGAGAGGTAAATAAGCTTGTTCCTTTGGAAGTTATTGATGAGAATGTCATGGAGAATATGGTTAAGGTGGCACTTTGGTGTATCCAAGATGAACCTCTTCTCCGGTCGACAATGAAAGGTGTAGTGTTGATGTTAGAAGGGATTACAGATATAACAATTCCTCCTTGTCCAGATTCAAATCGTGCATGA 462 0.4048 MDEFWTTMISDFGLAKLLMPDQTRTFTVIRGTRGYMAPEWNKNTPISLKADVYNYGIVLLETLCCRRNLDVNALEPEEILLSGWAYRCFVAREVNKLVPLEVIDENVMENMVKVALWCIQDEPLLRSTMKGVVLMLEGITDITIPPCPDSNRA 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01934 153 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 1 142 - -
Car05g01934 153 Gene3D Transferase(Phosphotransferase) domain 1 1 145 - -
Car05g01934 153 ProSiteProfiles Protein kinase domain profile. 1 144 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01934 153 Pfam Protein kinase domain 8 131 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01934 153 PANTHER RECEPTOR-LIKE PROTEIN KINASE 1 1 142 - -
Car05g01934 153 SUPERFAMILY Protein kinase-like (PK-like) 2 137 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01934 Car-Chr5 64588610 64589071 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01934 1 146 Receptor kinase-like Gene Family AT5G20050 37.821 2.67e-26 100
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Car05g01934 Pkinase 4.8e-13 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01934 - - ahf:114924106 262.692