Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01933 ATGTCCTTACCATCAGAAAATACTAGAGCTAGAGCTGAAACACAACCACCACTACCCAAGAAGATAGTACCTGGTACCTCACTTTCCCCTATCAGTGCTCACTCCTCTTCTTGGCTTTCCCATTCTGGCCTATTTGCTTTTGGATTTTATCCACAAGGCAATGGCTTTGTTGTTGGAATTTGGTTGGTTTGCAAGATGAACAATATAATAGTATGGACTGCAAACCGAGATGATCCTCCTGTAACCTCAACTGCAAAGCTACAATTTACCATGCACGGTAGGCTAATACTAACAGATCAAAAAGGACAAGAGAAGCTTGTTGTTAAGGCTAATGCAAGAGCTTCTTCTGGCTCCATGCTTGATTCTGGGAATTTTGTACTATACGGCAACGATAATTCCAGCATCATATGGCAGAGTTTCGATTACCCAACTGATACTAATCAATCTCTACCTTGTGGTGGCCAACTCTCCTCTAGTATATCAGAGACCAATCGGTCAACTGGAAGGTTTCAACTCAACATGCAGAATGATGGAAATCTTGTTCTGTATCCAGCATACATAGCTGCAACATCATGGGATGCTTACTGGGCCTCTGATACTAGTGCGGGTAATGAGGTCAAATATCATCTTTACCTCAACAAAACAGGTTCACTCCAGATTTTGAATAGCAGTAGTGTTTTTATTTCTAGCCCTATCGCCACTTTGATTGATGCTCTAGAAGACAATGACACTGGAGGAAACCAGACTATTTATCGTGCAACCCTTGATTTTGATGGATTTTTTCGGCTCTATGCTCATTATGTTAACAATGGCAGTGACAAAGTTATCAAAAGTTTTCCAGAGACCAACACGTGTGAAGTAAAAGGGTTTTGTGGCTTCAGCTACTGCACGTTCAACGATGACAAACTATTGTGCAGCTGTCTCCCTGGTTATAAACTTATAGATGAAAAAAACCAAGATACTAGTCTTGGCTGCAAAAGGAACTATTCGAAAGCTGAGTGTAAAGATGAAAAAGATGGTGAGGCCTTTTATAACATGGTACCAATGAACAATATTGTATGGGATGACCATCCTTATTTCGAAGATGAAGATACGTCATCGGAAGAACAATGCTCCTTTGCTTGTTTAGTTGATTGTAACTGTTGGGCTGCATTGTATGAAAAAGGAAGCTGCAAGAAACAAGGGCTGCCTTTGAGATATGCCAAACGAACACATGAAGGTGACGATTCTACCAAGGCGTTCTTCAAGGTGGGAAAAAACAGCTGGAAGGGGTATGAAAAACCTTTTCCCATTCCAATCAAGACTACAAGTAAGAAAGCAGTAGTGCATATTATTGTTGTTACATCTTTCAAGGAAGAGTTGGGTAAGGGATCTTTTGGAGCAGTATACAAAGGAACCTTAAACAAAGGTAAGACTAAGAGATTCATTGCAGTGAAGAGGCTAGAGAAGTTGGTGGAAGAAGGAGAAAGGGAGTTTCAAGCAGAAGTGAGGGCTATTGGAAAAACCCATCACAGGAACTTAGTTAGATTGCTAGGATTTTGTGCTGAGGGTTCTAAAAGGCTTCTGGTTTATGAATACATGAGCAATGGTTCACTTGGAAAGCTTCTGTTTGGTGATCAAAGACGTCGAATTGGGATGAGAGAGTAA 1647 0.408 MSLPSENTRARAETQPPLPKKIVPGTSLSPISAHSSSWLSHSGLFAFGFYPQGNGFVVGIWLVCKMNNIIVWTANRDDPPVTSTAKLQFTMHGRLILTDQKGQEKLVVKANARASSGSMLDSGNFVLYGNDNSSIIWQSFDYPTDTNQSLPCGGQLSSSISETNRSTGRFQLNMQNDGNLVLYPAYIAATSWDAYWASDTSAGNEVKYHLYLNKTGSLQILNSSSVFISSPIATLIDALEDNDTGGNQTIYRATLDFDGFFRLYAHYVNNGSDKVIKSFPETNTCEVKGFCGFSYCTFNDDKLLCSCLPGYKLIDEKNQDTSLGCKRNYSKAECKDEKDGEAFYNMVPMNNIVWDDHPYFEDEDTSSEEQCSFACLVDCNCWAALYEKGSCKKQGLPLRYAKRTHEGDDSTKAFFKVGKNSWKGYEKPFPIPIKTTSKKAVVHIIVVTSFKEELGKGSFGAVYKGTLNKGKTKRFIAVKRLEKLVEEGEREFQAEVRAIGKTHHRNLVRLLGFCAEGSKRLLVYEYMSNGSLGKLLFGDQRRRIGMRE 548
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01933 548 SUPERFAMILY alpha-D-mannose-specific plant lectins 69 183 IPR036426 -
Car05g01933 548 ProSiteProfiles Protein kinase domain profile. 448 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01933 548 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 19 445 - -
Car05g01933 548 PANTHER S-RECEPTOR KINASE-LIKE PROTEIN 448 543 - -
Car05g01933 548 SMART blect_4 29 143 IPR001480 -
Car05g01933 548 MobiDBLite consensus disorder prediction 1 25 - -
Car05g01933 548 PANTHER S-RECEPTOR KINASE-LIKE PROTEIN 19 445 - -
Car05g01933 548 Gene3D Phosphorylase Kinase; domain 1 454 528 - -
Car05g01933 548 Pfam D-mannose binding lectin 70 147 IPR001480 -
Car05g01933 548 Pfam Protein tyrosine and serine/threonine kinase 450 542 IPR001245 GO:0004672|GO:0006468
Car05g01933 548 Gene3D - 149 273 IPR036426 -
Car05g01933 548 SUPERFAMILY alpha-D-mannose-specific plant lectins 165 264 IPR036426 -
Car05g01933 548 Coils Coil 478 498 - -
Car05g01933 548 ProSitePatterns Protein kinases ATP-binding region signature. 454 479 IPR017441 GO:0005524
Car05g01933 548 ProSiteProfiles Bulb-type lectin domain profile. 24 140 IPR001480 -
Car05g01933 548 PANTHER G-TYPE LECTIN S-RECEPTOR-LIKE SERINE/THREONINE-PROTEIN KINASE SD2-5 448 543 - -
Car05g01933 548 SUPERFAMILY Protein kinase-like (PK-like) 450 540 IPR011009 -
Car05g01933 548 Gene3D - 19 141 IPR036426 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01933 Car-Chr5 64580750 64582574 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01933 453 538 Receptor kinase-like Gene Family AT4G23160 56.977 2.56e-22 99.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_SD-2b Car05g01933 PK_Tyr_Ser-Thr 6.2e-18 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01933 - - ahf:112707609 533.487