Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Car05g01917 | ATGGACGAAACAATGGCAGCAAGATATTGGTGTCACGCGTGTTCTCAAATAGTCAATCCTGTCATGGAAGTGGAGATGAAATGCCCAGTTTGCCAAAGTGGATTTGTTGAAGAAATGAACAGTGCTGCTGGTATCAGCGAGATGCAAGGTATCGGCGAGATGCAAAATATACCAGAAAATGATTTTGGTTCGGATCGTGCTGCCTCCCTTTGGGCACCAATCTTGCTAGGCATGATGAGTAATCCGCGACATCGTCGAAGATTGAGACGAATAGAGCTTGAAAATGACTATAATAGTGGTAGTCGTGATGATGATAATGGTGGTGTAGGCCATTATGATCGAGAGCTCGAGTCTATCCTTCGGAGGAGGAGAAGAAGCTCAGCTACCATTCAGCAACTGCTCCAAGGCATAAGAGCTGGACTGACATCTGAATCACATGAGAATACAGACAGTGATGACCATGTTagagaaagagaaagagaaagagagCATGTAATTTTGATCAATCCTTTTAATCAGACTATTATAGTTCAAGGTTCATATGATTCTAACCGGGATCAAAGTGATATTCATAGCACCATTGGTTCTCTGGGTGACTATTTCGTAGGGCCTGGTTTGGATCTATTGTTACAACATTTGGCTGAGAACGACCCCAATAGGTACGGAACTCCACCCGCCCCGAAGGAAGCTGTTGAAGCTCTACCCACTGTGAAGATCAATGAGAATTTGCAGTGTTCTGTCTGTTTGGATGATTTTGAAGTTGGTTCTGAAGCTAAAGAGATGCCATGTAAACATAGGTTTCATAGTGCATGCATCCTGCCCTGGCTTGAGCTTCATAGTTCTTGTCCAGTTTGCAGGTTTCAATTGCGAGCAGATGAATCTAAGCAAGACTCCGTTGCGTCAAGGAGTAGCAGAAATCAAAGGGAGGATGAAAATACTGTGCATGACAATGCTGAAGGAGACAATGAAGGGAGAAATTCAAGTGGGGGTAGAAGATTCTCATTTCCTTGGCCTTTCAATGGATTATTTtcatcatcatcatcgtcatcatcatcttcTAGTTCAAATGCAAATGGAAATGGTACTCAATCAGAAAGAAGCTGA | 1104 | 0.4112 | MDETMAARYWCHACSQIVNPVMEVEMKCPVCQSGFVEEMNSAAGISEMQGIGEMQNIPENDFGSDRAASLWAPILLGMMSNPRHRRRLRRIELENDYNSGSRDDDNGGVGHYDRELESILRRRRRSSATIQQLLQGIRAGLTSESHENTDSDDHVREREREREHVILINPFNQTIIVQGSYDSNRDQSDIHSTIGSLGDYFVGPGLDLLLQHLAENDPNRYGTPPAPKEAVEALPTVKINENLQCSVCLDDFEVGSEAKEMPCKHRFHSACILPWLELHSSCPVCRFQLRADESKQDSVASRSSRNQREDENTVHDNAEGDNEGRNSSGGRRFSFPWPFNGLFSSSSSSSSSSSSNANGNGTQSERS | 367 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Car05g01917 | 367 | MobiDBLite | consensus disorder prediction | 296 | 326 | - | - | |
Car05g01917 | 367 | PANTHER | RING/U-BOX SUPERFAMILY PROTEIN | 2 | 345 | - | - | |
Car05g01917 | 367 | PANTHER | E3 UBIQUITIN-PROTEIN LIGASE PRAJA | 2 | 345 | - | - | |
Car05g01917 | 367 | MobiDBLite | consensus disorder prediction | 137 | 156 | - | - | |
Car05g01917 | 367 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 212 | 292 | IPR013083 | - | |
Car05g01917 | 367 | SUPERFAMILY | RING/U-box | 234 | 292 | - | - | |
Car05g01917 | 367 | Pfam | Ring finger domain | 244 | 286 | IPR001841 | - | |
Car05g01917 | 367 | MobiDBLite | consensus disorder prediction | 339 | 367 | - | - | |
Car05g01917 | 367 | SMART | ring_2 | 245 | 285 | IPR001841 | - | |
Car05g01917 | 367 | MobiDBLite | consensus disorder prediction | 296 | 367 | - | - | |
Car05g01917 | 367 | Pfam | zinc-ribbon | 8 | 39 | IPR039525 | GO:0061630 | |
Car05g01917 | 367 | CDD | RING-H2_RNF126_like | 244 | 286 | - | - | |
Car05g01917 | 367 | ProSiteProfiles | Zinc finger RING-type profile. | 245 | 286 | IPR001841 | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Car05g01917 | Car-Chr5 | 64443032 | 64445455 | Dispersed/Transposed |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Car05g01917 | 133 | 292 | C3H Transcription Factor Family | AT1G26800 | 35.802 | 3.62e-26 | 102 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Car05g01917 | K11982 | - | gmx:100784876 | 469.159 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Car05g01917 | 05 | 64443032 | 64445455 | Car05g01917 | 05 | 64443032 | 64445455 | ECH |