Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01909 ATGAGCTTCATCGACGATGGCATTGACCTAGACCCTTCAGACTTCGGCTCATCGGTCCCTCTTAAAAAAGTCCCGAACGGCGACGTATTCCAAGCTTCCCGCGCTGGCGACCTCGACCGTCTCCGCTACCTTCTCGAATGCGGCGTTAACGTCAACGCCCGCGACCAATGGGACTCCGTCGCACTCTACTATGCTTGTCTCGCCGGTCACCTCGACGCCGCTCGTATGCTTCTCGAAAGCGGTGCTATCTGCTCCGAACATACCTTCGACGGTGACCGTTGTCATTACGCTGCTCTCAATTTGAAGGTTCGTAAACTTCTCAAAGCGTTTGAAGCTCGCCCTCCTCCTTTGGACCCCTTGCAGTCTTCTCTTCGTGATACTTTCTTCGCTTGTCCCGCTAATTCGCTTTCCGGTGGCTTTCAGTTTCCTGGTATTTCATCCACTCAAGGATCCAATTCCAACTACTTTCCTCCAGATGTGGTTTTTACTGTACAAGGAAGACCCATTGAAGCTCACAGAGTCATATTAAGTGCAAGGTCACCATTTTTCAAGAAAAAGTTTGAGACTGATTGGAAAGAACGCAGTGAAATAAGATTTTCAAGGGAAAAGTTGTCCTATCATGCACTTTATAGCCTTATACATTTCTTTTATTCGGACAGATTAGAGATTGCTGTGGATGACATGGAAGATCTTGTGAGAATTTGCAAAGTATGCAAATGTGAATCACTGCAGAAAATTCTTGAGAAAGAAGTAATTCATCAAAAATATGCAGAGTATAAAGCATTGATAGATGATGACAATTCTCAGAAACGGTATATTTTACAGGGTCTATCCCTTCCTGAAGAAGATAGGCTTCCTGCAGCCTTGCGCAGAATCCTTTTGACAGCCCTTTCAAATTCCACTCATGAAAATGGTCAAGATAGCGGAATCGATAAATTGGTATCTAGGATGGATGCCATGAATATGGCTAAATCTCTAGATGATCTGGCTGATGTTTGTATCAGAGTTGATGGCAAAAATTTTCGATGCCATAAAGTTATTCTAGCATCGAGGTCAGAATATTTCAAAGCAAGATTATCACGTATGAAGGATTTCCACGAAGGGAAAGATGAATTATATATTGACTTCCTTCCTTGCCTTGAAGAACATGACATGAGTATGGAATCATTTGAGAAAATGATTGAATATATgtacactgatcgattgcatgaaataaatccagatcagGCTGAAGAAATGTTCGATATTGCTTCTAGATACTTAATGTTTCCTCTTAAGCGTGCGGTGGCTGATGTCTTGTTACCACACTTGGAAATGGTGTCACCCGAAGAACTTTGCAATTGGTTAATGCTAGCGGACATGTATGGTGTTTTCAAGATTCGGGAACACTGTCTAGACACCATTGCCTGTAATTTTGAAACATTTGCTGATACTAAAGAATTCCGGGCAATGCTGTTGACTTTGCCTGCACCATCTGGAGATTCATCTCTTCGTACCACTGTCCCGAGCATTCCTGGATCTGCCCTGAATAATGATCAAGGAAATCTTCTTGATGATTTACGTGACAAATGGCTTGAAATTGAAGCTGCTGAGCTTGACGAGAGAGATGAGAGTGCTTTGCAATTTGACAAGTGCCTTGAGATGCTTTTGATTGTTGCAGAGCAAGAAAAATCATCAGGAAATGCTGATTCGGAAGGTATTAATGCTATCACACGCTTGACTTTCTCTCCAATCACACCTGTAGTTTCAGGTGAAGAAAAAGAACCGTAG 1770 0.4186 MSFIDDGIDLDPSDFGSSVPLKKVPNGDVFQASRAGDLDRLRYLLECGVNVNARDQWDSVALYYACLAGHLDAARMLLESGAICSEHTFDGDRCHYAALNLKVRKLLKAFEARPPPLDPLQSSLRDTFFACPANSLSGGFQFPGISSTQGSNSNYFPPDVVFTVQGRPIEAHRVILSARSPFFKKKFETDWKERSEIRFSREKLSYHALYSLIHFFYSDRLEIAVDDMEDLVRICKVCKCESLQKILEKEVIHQKYAEYKALIDDDNSQKRYILQGLSLPEEDRLPAALRRILLTALSNSTHENGQDSGIDKLVSRMDAMNMAKSLDDLADVCIRVDGKNFRCHKVILASRSEYFKARLSRMKDFHEGKDELYIDFLPCLEEHDMSMESFEKMIEYMYTDRLHEINPDQAEEMFDIASRYLMFPLKRAVADVLLPHLEMVSPEELCNWLMLADMYGVFKIREHCLDTIACNFETFADTKEFRAMLLTLPAPSGDSSLRTTVPSIPGSALNNDQGNLLDDLRDKWLEIEAAELDERDESALQFDKCLEMLLIVAEQEKSSGNADSEGINAITRLTFSPITPVVSGEEKEP 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01909 589 PANTHER ANKYRIN REPEAT AND BTB/POZ DOMAIN-CONTAINING PROTEIN 1 7 553 IPR044515 -
Car05g01909 589 ProSiteProfiles BTB domain profile. 330 406 IPR000210 GO:0005515
Car05g01909 589 SUPERFAMILY POZ domain 155 250 IPR011333 -
Car05g01909 589 Gene3D Potassium Channel Kv1.1; Chain A 150 268 IPR011333 -
Car05g01909 589 Gene3D Potassium Channel Kv1.1; Chain A 311 469 IPR011333 -
Car05g01909 589 Pfam Ankyrin repeats (many copies) 30 78 IPR002110 GO:0005515
Car05g01909 589 SMART BTB_4 158 255 IPR000210 GO:0005515
Car05g01909 589 SMART BTB_4 330 437 IPR000210 GO:0005515
Car05g01909 589 Pfam BTB/POZ domain 156 254 IPR000210 GO:0005515
Car05g01909 589 Pfam BTB/POZ domain 325 433 IPR000210 GO:0005515
Car05g01909 589 SUPERFAMILY POZ domain 317 436 IPR011333 -
Car05g01909 589 Gene3D - 3 135 IPR036770 -
Car05g01909 589 CDD BTB_POZ_ZBTB_KLHL-like 329 420 - -
Car05g01909 589 ProSiteProfiles BTB domain profile. 158 225 IPR000210 GO:0005515
Car05g01909 589 SUPERFAMILY Ankyrin repeat 31 108 IPR036770 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Car05g01909 BTB 1.7e-17 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01909 K10520 - gmx:100812009 922.924