Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01905 ATGGAAGCAAAGAAAGAGGAGGCACTTAAAGAAATACAGAATGCTGAGAAAAGATTTGCTCAGAGAGACTTTGTTGGAGCTAAAAGTTATGCTTTAAAAGCCCAAACTCTATGTCCTGAATTCGAAGGTATATCTCGAATGGTGACTACTTTTGAAGTTCACATTGCCTCTCAAGTCACATgtaatggtgaactagattgttattccattctgggcttaaaaccttcagcaaatatagaagctgtgaagagacagtacaagaagatgGCTGGGTTGCTTCACCCTGATAAGAACAAGTGTGTGGGAGCTGATGGGGCATTTAAACTTGTTTCTGAGGCATGGACCAGGTTGTCTAGTAGTTATGATACGAAGAGAAATGCACAATTGGGTGCTGGGCATGGACTTAGTCACAAAGATTTGTCTTCAGGTCACGCTTCTGGTGGTAATCGTCGCGACACTTTTTGGACAATTTGTACTTCTTGCAAAGTTCAGTATGAGTATCTGCGCAAGTATATAAATAAGAAGCTTTCTTGTAAGAATTGTCGTGGAACTTTCATAGCTGTCGAAACAGCCCCGGCAAATGGTTCATTCCCATATTCTCCTTGGTCGTATGGGTCTGGCAGTGGGCATGGAAGTCATTCGTATGATGGACTTACATATGTTCCCACTAGTGGCACCTATTTAAATGGCAATGGGGTCACCGGATACCATTCGGGACCCGGATACGAGTATGTTTCAAATGTTCCATATCAGTGGAGTTCTGTCGGATATGTCAATCAAAATGGATCAACTAAGGGAAGCGGCAAAGTTAAACCAGGAGCTGATAGGAAGCATTACATGACAGAGACAGCGGTCAGTATGAATTCAGATGTATCATTCTCCCGTAATGAACTACAAGAGGTTAAGCTGAGTAGACCTGAGAAGAAAAGGAAAGTTGTGGGGGCCAGTTTAAAAAATGTTCATGAAGGAAAGGGTTCAAAATGTGCTTCGGTATCAGCATTGGCTAATGGGAATGAAAGTGTTGGACATAGACAGAGGCTTTCCAGCACGAGTGAAGTTCCAACAAAACAGTACTCCATGGTACCTGCTTTTGATGCAAGAAAATTATTGATGGAGAAGGCCAGGACAGTAATAAGGAAGAAACTGGAAGAGATTAAGTTGTCATCTGAAACTGCAGCTGCTGTTAATGAGAGAAAAAAATCTCAAGCTGATGTTGGTCAGGTCAAAAGAGACACGTATATAAAAACAGTTCCAAATGTTTCTAATAATCAGTTAGAACATAGGAAAACTGGTCCAGTGACGATTACTGTCCCAGATTCTGACTTTCATGACTTTGATAAAGATAGGTCAGAGCCATGCTTCAAGCCAAAGCAAATATGGGCCTTGTATGATGAGGAGGATGGGATGCCCCGCTTGTATTGTCTGATCCGCGAGGTTGTCTCTGTCAATCCATTCAAGGTTAACATTAGTTACTTGAGTTCAAAAACCGATAGCGAATTTGGAGAAGTGAACTGGCTTGTTTCAGGTTTCACCAAATCTTGTGGAAATTTCAGGGCCATGACCGCTGATGTTGTTGACCAAGTTAACATTTTTTCTCATGTTCTAAGCAAGGTGAAGGCTGGTCGAGGCGGTTGTGTTCGCATATACCCCAAATGTGGAGAGATTTGGGCTGTATACAGAAACTGGTCAACAAATTGGAACAGATCTACACCAGATGAAGTAAGGCATCAGTATGATATGGTGGAGGTGCTAGATGATTATTCTGAGGAGCTTGGCATTTGTGCTAGCCCTCTCATTAAGTTGGATGGTTTCAAAACCGTGTACAAGACGGATACTGACAAAAATGCCATTAGATGGATACCAAGAAAAGAAATGGTGCGCTTTTCGCATCAAGTGCCGTCGTGGTTGTTGAAGGGGGAGGAAGCAAGCAATTTGCCTGACAGGTGTTGGGATCTCGATCCAGCTGCAACTCCAGATGAGCTCCTTCATGCTGCTATAGAAGCTAAAGCTTTGTAG 2016 0.4087 MEAKKEEALKEIQNAEKRFAQRDFVGAKSYALKAQTLCPEFEGISRMVTTFEVHIASQVTCNGELDCYSILGLKPSANIEAVKRQYKKMAGLLHPDKNKCVGADGAFKLVSEAWTRLSSSYDTKRNAQLGAGHGLSHKDLSSGHASGGNRRDTFWTICTSCKVQYEYLRKYINKKLSCKNCRGTFIAVETAPANGSFPYSPWSYGSGSGHGSHSYDGLTYVPTSGTYLNGNGVTGYHSGPGYEYVSNVPYQWSSVGYVNQNGSTKGSGKVKPGADRKHYMTETAVSMNSDVSFSRNELQEVKLSRPEKKRKVVGASLKNVHEGKGSKCASVSALANGNESVGHRQRLSSTSEVPTKQYSMVPAFDARKLLMEKARTVIRKKLEEIKLSSETAAAVNERKKSQADVGQVKRDTYIKTVPNVSNNQLEHRKTGPVTITVPDSDFHDFDKDRSEPCFKPKQIWALYDEEDGMPRLYCLIREVVSVNPFKVNISYLSSKTDSEFGEVNWLVSGFTKSCGNFRAMTADVVDQVNIFSHVLSKVKAGRGGCVRIYPKCGEIWAVYRNWSTNWNRSTPDEVRHQYDMVEVLDDYSEELGICASPLIKLDGFKTVYKTDTDKNAIRWIPRKEMVRFSHQVPSWLLKGEEASNLPDRCWDLDPAATPDELLHAAIEAKAL 671
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01905 671 Gene3D DnaJ domain 51 125 IPR036869 -
Car05g01905 671 PANTHER BNAC03G44070D PROTEIN 1 664 - -
Car05g01905 671 PRINTS DnaJ domain signature 68 86 IPR001623 -
Car05g01905 671 PRINTS DnaJ domain signature 86 101 IPR001623 -
Car05g01905 671 PRINTS DnaJ domain signature 102 122 IPR001623 -
Car05g01905 671 PANTHER BNAC03G44070D PROTEIN 1 664 - -
Car05g01905 671 SMART dnaj_3 65 122 IPR001623 -
Car05g01905 671 Pfam DnaJ domain 66 120 IPR001623 -
Car05g01905 671 Pfam Domain of unknown function (DUF3444) 434 641 IPR024593 -
Car05g01905 671 ProSiteProfiles dnaJ domain profile. 66 130 IPR001623 -
Car05g01905 671 CDD DnaJ 66 118 IPR001623 -
Car05g01905 671 SUPERFAMILY Chaperone J-domain 62 119 IPR036869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01905 Car-Chr5 64308328 64311497 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01905 5 188 SUVH1 or 3-interacting DNAJ domain-containing protein superfamily AT2G01710 29.592 1.03e-19 89.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01905 - - gmx:100792639 981.089
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01905 05 64308328 64311497 Car02g02244 02 52463535 52468751 PCT