Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01904 ATGGGTCGGTGCCGAACCGCGTCACGCTCCAGTGACGATGACCCCAACCAGAGATCCAAGAGAAAAAGGGCCGCTTTATATGCAGAGAATTTAGAAACTTCATCTACAGGCTTGGGAATAACTGAAGGCAAAGCATCACTATATCACTGTAATTACTGCAACAAAGATATTTCAGGGAAGATTCGCATCAAGTGCGTCGTGTGTCAAGATTTTGATCTTTGCATAGAGTGCTTCTCTGTTGGTGCTGAGGTGACACCTCATAAAAGCAATCATCCATATCGGGTTATGGATAATCTATCTTTTCCACTTACATCTCCAGATTGGAGTGCAGATGAAGAGAGGTTACTTCTTGAAGCCATTGAAATGTATGGATTTGGGCATTGGAATGACGTTGCAGACTATGTTGGAACAAAAGGAAAACCTCAGTGTATTGACCACTATAATGATGTATACATGAACTCACCATGTTTTCCTCTACCTGATTTGTCTCATGTTATGGGAAAGAGCAAAGAGGAACTCCTTGCCATGGCAAAGGGACATCAAGTCAACAGAGAATTTCCTCCAAAGGCAGAGCTTACTCTGAAAGAAGAGCCTCTCATGTCTGATGGAATAAACTCTGAAGAATCTAAAAAGGAAGAAGCCACTAATCAAACAATGTCTAGGCTAACCTCAGTATGCGATAAAGCTCTTTCAAGTACAATCAAGAAGGCTTCCAATGTGAGCCAAAATAATGATAGAGTTAAGGTGGAAGTAGAATCTCAAGCAGATCGGAGCATTGGTGAAAAGAAACCTAAATTTTCTGGGGAAGATAGGTCTTATATGAAAGAATTAAGAGGATACAATTTTAAGAGAGGTGAATTTGATATTGAATACGACAATGATGCAGAGCAAGTTTTAGCAGAAATGGAATTTAAGGACactgatactgaagctgaacatgaaatgaaactgCAAGTGCTCCGTATCTACTCAAAAAGGTTAGATGAACGGAAGCGCAGAAAAAATTTTATACTTGAAAGAGATTTACTATGTCCCGATCCTTTTGAGAAATCTCTCTCACCTGAAGAGCTTCAAATATGTCAACCGTACAAGGTCTTCATGCGGTTTCATTCTAAAGAAGAGCATGAGGAGTTGCTAAAAACTGTTATTGAAGAACACCGGCTTGTCAAAAGAATACAAGATTTACAGGAAGCTCGAATTGCTGGCTGTGTAACTGCTGTTGAAGCTTATCGATTTATTGAACAAAAGAAGACAAAGGAAGCTGAACAAGGTGCCTGTAAAGAAAGTGGTCTGATTGGAACAAGTGTTAAGACTTTACAGAGGCCGATTTATCCCAAAATAGAGCTTGGTAGTAGCCCACGCGGTCTCCATAAGGGCACTACAGCATCATTTGCTGGTATCAAGGATACACACACAGCCATACAAGCTATCACAAGGTCGCTAGAAGAATGGGATATCAGTGATTTTGAAGGGGCTGAATTACTATCTGAATCT 1494 0.3956 MGRCRTASRSSDDDPNQRSKRKRAALYAENLETSSTGLGITEGKASLYHCNYCNKDISGKIRIKCVVCQDFDLCIECFSVGAEVTPHKSNHPYRVMDNLSFPLTSPDWSADEERLLLEAIEMYGFGHWNDVADYVGTKGKPQCIDHYNDVYMNSPCFPLPDLSHVMGKSKEELLAMAKGHQVNREFPPKAELTLKEEPLMSDGINSEESKKEEATNQTMSRLTSVCDKALSSTIKKASNVSQNNDRVKVEVESQADRSIGEKKPKFSGEDRSYMKELRGYNFKRGEFDIEYDNDAEQVLAEMEFKDTDTEAEHEMKLQVLRIYSKRLDERKRRKNFILERDLLCPDPFEKSLSPEELQICQPYKVFMRFHSKEEHEELLKTVIEEHRLVKRIQDLQEARIAGCVTAVEAYRFIEQKKTKEAEQGACKESGLIGTSVKTLQRPIYPKIELGSSPRGLHKGTTASFAGIKDTHTAIQAITRSLEEWDISDFEGAELLSES 498
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01904 498 PANTHER TRANSCRIPTIONAL ADAPTOR 2 ADA2 -RELATED 1 498 - -
Car05g01904 498 CDD SANT 108 148 IPR001005 -
Car05g01904 498 ProSiteProfiles SANT domain profile. 103 155 IPR017884 -
Car05g01904 498 MobiDBLite consensus disorder prediction 249 267 - -
Car05g01904 498 Pfam Myb-like DNA-binding domain 107 149 IPR001005 -
Car05g01904 498 Gene3D - 102 153 - -
Car05g01904 498 Pfam Zinc finger, ZZ type 48 88 IPR000433 GO:0008270
Car05g01904 498 Gene3D - 41 96 IPR043145 -
Car05g01904 498 PIRSF Txn_adaptor_ADA2 35 498 IPR016827 GO:0003713|GO:0006357|GO:0035065
Car05g01904 498 ProSiteProfiles Myb-like domain profile. 108 151 IPR001005 -
Car05g01904 498 SUPERFAMILY Homeodomain-like 100 154 IPR009057 -
Car05g01904 498 PANTHER TRANSCRIPTIONAL ADAPTER ADA2B 1 498 IPR034318 GO:0003713|GO:0006357|GO:0035065
Car05g01904 498 MobiDBLite consensus disorder prediction 1 21 - -
Car05g01904 498 MobiDBLite consensus disorder prediction 245 267 - -
Car05g01904 498 CDD ZZ_ADA2 48 96 IPR041983 -
Car05g01904 498 SMART zz_5 44 89 IPR000433 GO:0008270
Car05g01904 498 ProSiteProfiles Zinc finger ZZ-type profile. 45 101 IPR000433 GO:0008270
Car05g01904 498 SMART sant 104 153 IPR001005 -
Car05g01904 498 SUPERFAMILY RING/U-box 48 111 - -
Car05g01904 498 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 108 155 IPR017930 -
Car05g01904 498 ProSitePatterns Zinc finger ZZ-type signature. 50 77 IPR000433 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01904 Car-Chr5 64287935 64304193 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01904 1 498 EF-hand Containing Proteins AT3G07740 52.539 4.53e-163 471
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Car05g01904 Myb_DNA-binding 7.1e-11 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01904 K11314 - gmx:100779424 776.163