Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01897 ATGGCTCGTGAGCAACTAGGAGTTCTGAGTGCTCTTGATTCAGCCAAGACACAATGGTACCATTTCACAGCCATTATAATAGCTGGTATGGGATTCTTCACAGATGCATATGACCTTTTCTGCATACCAAACGTGACAAAATTACTGGGAAGAATTTACTACACACATAAAGGTTCACCAAAACCAGGAACTTTACCTCCAAATGTATCAGCAGCAGTTAACGGTGTTGCACTTTGTGGAACACTAGCAGGTCAACTTTTCTTTGGTTGGCTCGGGGACAAAATGGGAAGAAAAAAAGTGTACGGACTAACACTAGCACTCATGGTATTCTCTTCTCTCGCTTCAGGTCTATCTTTCGGTCACTCTGCCAAAGGAACTATTTCAACTCTTTGTTTCTTTAGATTCTGGCTTGGTTTTGGTATTGGTGGTGATTACCCTCTTTCTGCTACAATTATGTCTGAATATGCTAATAAAAAGACACGTGGTGCTTTTATAGCTTCTGTTTTCGCTATGCAAGGTTTTGGTATTTTGGCTGGTGGAATTGTTTCTTTGTTAGTTTCAACTGCTTTTGATCATGCTTATAAAGCTCCACCATATAAACTTAATCCTGAAGCTTCACTTGTGCCTCAAGCTGATTATGTTTGGCGTATCATTCTCATGTTTGGGGCTGTTCCTGCTGCTTTAACTTACTATTGGCGTATGAAAATGCCTGAGACTGCAAGGTACACTGCACTTGTTGCTAAGAATGCAAAACAAGCAGCACAAGACATGTCAACGGTTTTACAAGTTGAGATTGAAGCTGAACAACAGAAACTTGACAACATAGTTGTGAGAGAACAGAACAGCTTTGGTTTGTTTAGTAAAGAGTTTGTTAAAAGACATGGACTTCATTTACTTGGAACAACTTCAACTTGGTTTTTACTTGACATTGCTTATTATAGTTCAAATCTTTTTCAAAAGGATATTTATAGTAGTATTGGTTGGTTACCACCTGCTGCTGATATGAATGCAATTCATGAAGTTTTCAAAGTTGCTAGAGCAACAACACTAATAGCACTTTGTGGAACTGTTCCTGGTTATTGGTTCACTGTGGCGTTTATCGATGTTATCGGTCGGTTCTTCATTCAAGTCATGGGATTCTTCTTCATGACAGTGTTCATGTTTGCACTTGCCCTTCCTTATCATCATTGGACTAAGAAAGAAAACAGAATTGGGTTTTTGGTTATGTATGCTTTCACTTTTTTCTTCGCGAATTTTGGCCCGAATTCAACTACTTTTGTTGTGCCTGCTGAGATATTTCCGGCTAGGTTGAGATCAACATGTCATGGGATATCTTCTGCAGCAGGAAAAGCTGGAGCAATTATAGGTGCTTTTGGATTTTTGTATGCTTCACAAAGTAAGGATCCGAAAAAGAGAGATGCAGGGTACCCTGCTGGTATTGGAATGAAAAACACTCTTATTTTGCTTGCTGTTGTTAACTGTCTTGGCATATTTTTCACTTTTCTTGTGCCTGAAGCTAAAGGAAAATCATTGGAAGAGATGAGTGGAGAGAATGAAGAAGAATCTGGTGATGATGTTGCTGTTGTTGATCCACATGCCTCTTCTAATAGGACTGTTCCAGTGTAA 1626 0.3924 MAREQLGVLSALDSAKTQWYHFTAIIIAGMGFFTDAYDLFCIPNVTKLLGRIYYTHKGSPKPGTLPPNVSAAVNGVALCGTLAGQLFFGWLGDKMGRKKVYGLTLALMVFSSLASGLSFGHSAKGTISTLCFFRFWLGFGIGGDYPLSATIMSEYANKKTRGAFIASVFAMQGFGILAGGIVSLLVSTAFDHAYKAPPYKLNPEASLVPQADYVWRIILMFGAVPAALTYYWRMKMPETARYTALVAKNAKQAAQDMSTVLQVEIEAEQQKLDNIVVREQNSFGLFSKEFVKRHGLHLLGTTSTWFLLDIAYYSSNLFQKDIYSSIGWLPPAADMNAIHEVFKVARATTLIALCGTVPGYWFTVAFIDVIGRFFIQVMGFFFMTVFMFALALPYHHWTKKENRIGFLVMYAFTFFFANFGPNSTTFVVPAEIFPARLRSTCHGISSAAGKAGAIIGAFGFLYASQSKDPKKRDAGYPAGIGMKNTLILLAVVNCLGIFFTFLVPEAKGKSLEEMSGENEEESGDDVAVVDPHASSNRTVPV 541
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01897 541 SUPERFAMILY MFS general substrate transporter 12 515 IPR036259 -
Car05g01897 541 CDD MFS_PhT 25 507 - -
Car05g01897 541 Gene3D MFS general substrate transporter like domains 20 531 IPR036259 -
Car05g01897 541 TIGRFAM 2A0109: phosphate:H+ symporter 11 517 IPR004738 GO:0005315|GO:0006817|GO:0016021
Car05g01897 541 MobiDBLite consensus disorder prediction 512 541 - -
Car05g01897 541 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 5 528 - -
Car05g01897 541 PANTHER INORGANIC PHOSPHATE TRANSPORTER 1-4-LIKE 5 528 - -
Car05g01897 541 Pfam Sugar (and other) transporter 26 515 IPR005828 GO:0016021|GO:0022857|GO:0055085
Car05g01897 541 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 508 IPR020846 GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01897 Car-Chr5 64174134 64176518 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01897 1 541 Inorganic Solute Cotransporters AT2G32830 76.199 0.0 867
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01897 K08176 - gmx:100795623 858.981