Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01882 ATGGGGCTACCAACTCATACCCTTCATTTTCTCCTCATAATTCTTCTTGTCTCTCTACTTCACAAACCTACTTTTGCAGTGAAAAAGTCATATGTGGTGTACTTAGGAGGCCATTCACATGATTCAGAATTGTCTTCAACAGTTGACTTCAATCGTGTAACAGATTCTCACTATGAGTTTCTGGGATCTTTCTTGGGAAGCTCTAATATAGCAAAAGAGTCAATATTTTATTCCTACACAAGACATATAAATGGTTTTGCTGCAAATTTGGAAGAAGAAGTAGCAGCTGAGATAACAAAGCATCCGAAAGTGTTGTCGGTGTTTGAGAATAGAGGAAGGAAACTACACACAACTCATTCATGGGAGTTTATGGGGTTAGAAGAAAATGGAGTGATACCATCCACTTCAGTTTGGAACAAAGCAAGATTTGGTGAAGGTGTCATTATAGCTAACCTCGATACAGGTGTTTGGCCTGAATCCAAGAGCTTTAGTGATGAAGGGTTTGGACCAATTCCATCAAAGTGGAGAGGAATATGTGACAAGGGCTATCATCATCATCATGCTTTTCACTGCAACAGGAAACTGATTGGAGCAAGGTATTTCAACAAAGGCTATGCATCTGCAGCTGGTCCACTCAACTCAACCTTTGAGTCACCACGTGACAATGAAGGCCATGGATCCCATACTCTATCAACAGCTGGTGGCAACATGGTATCTGGTATCAGTGTCTTTGGTCAAGGCTATGGAACAGCAAAGGGTGGTTCACCAAAAGCCAGAGTTGCATCATACAAGGTTTGTTGGCCTCCAATTGATGGTAATGAGTGCTTTGAAGCAGATATACTTGCAGGCTTTGATATGGCAATCCATGATGGTGTTGATGTCTTGTCTGTGTCACTTGGTGGTTCTTCTTCTTCCCTTTTCAATGACAGTGTTGCCATTGGATCTTTTCATGCTGCTAAGAAAGGTATTGTTGTGGTTTGTTCTGCTGGTAATAGTGGGCCTAGTGATGCTACTGCAGAAAACCTTGCTCCTTGGTATATCACAGTTGGTGCTAGCACTATGGATAGAGAGTTCCCTAGTTATGTTGTCCTTGGTAACAACATAAGCCTCAAGGGAGAAAGCTTATCAGCTACAAGATTAGCAGACAAATTCTACCCTAGTATTTTAGCAACAGATGCTAAATTGGGGAGTGCAACAGCTGAAGATGCCAAGCTTTGCATGAATCGAACTCTTGATCCCAGCAAGGTGAAGGGTAAGATAGTAATATGCCTGAGAGGAATAAATGCAAGAGTGGACAAGGGAGAGCAAGCACTTCTAGCTGGTGCTGTTGGGATGGTCCTTGTCAATGATAAGATCAATGGGAATGAAGTTATAGCTGATCCTCACGTTCTTCCTGCTACTCACATCACTTTCTCTGATGGTTTAGCTCTCTTTAATTACATCAACTCATCCAAGTCTCCAGTGGTTTATATTACACATCCAACAACACGATTGCATACTAAGCCAGCCCCTTTCATGGCAGCATTTTCATCCAAAGGGCCAAATACTATTGTACCTGAGATTCTAAAGCCTGATATCACTGCACCAGGAGTGTCAGTTATAGCAGCCTACACTGAAGCTGAAGGGCCAACAAACCAAGAGTTCGACTATCGCCGGATTCCATATAACTCAGTCtcaggcacatctatgtcatgccctcacatttcaggaattgcaggcttgttgaaaaccttgcatccttcttggagtcctgctgctattaaatcagctatcatgactacagCAACTACATTAGACAATGAGGCAGAGCCAATACTGAATGCTACTGAAAGCCAAGCTACACCATTTAGCTATGGAGCAGGACATGTTCAACCAAACAAAGCAATGGATCCTGGCCTTGTTTATGACACAACAGTGAATGATTACCTCAACTTCTTATGTGCTCTAGGATATGATGAAACACAAATCTCAGTGTTTTCGAAAGCTCCTCACCCATGCCATAAGAACTTTAGTCTAATCAACCTAAACTATCCTTCAATCACAGTCCCAAATCTCTCTGGGTCAGTGACAGTTACAAGGACATTAAAAAATGTTGGTTCTCCAGCAACATACATTGCTCGTGTTCAGAACCCAAATGGGATCACTGTTTCTGTGAAGCCAAATATCTTGGAGTTCAAAAATGTTGGTGAAGAAAAGAGGTTTGAAATAAGATTGAAGGTGAGGAAAGGAAAAGGAAAAGAGAAGTATGTATTTGGAAAGCTGATTTGGTCAGATGGAAAGCATTATGttaagagtccaatagttgtgaaggctcactag 2319 0.3907 MGLPTHTLHFLLIILLVSLLHKPTFAVKKSYVVYLGGHSHDSELSSTVDFNRVTDSHYEFLGSFLGSSNIAKESIFYSYTRHINGFAANLEEEVAAEITKHPKVLSVFENRGRKLHTTHSWEFMGLEENGVIPSTSVWNKARFGEGVIIANLDTGVWPESKSFSDEGFGPIPSKWRGICDKGYHHHHAFHCNRKLIGARYFNKGYASAAGPLNSTFESPRDNEGHGSHTLSTAGGNMVSGISVFGQGYGTAKGGSPKARVASYKVCWPPIDGNECFEADILAGFDMAIHDGVDVLSVSLGGSSSSLFNDSVAIGSFHAAKKGIVVVCSAGNSGPSDATAENLAPWYITVGASTMDREFPSYVVLGNNISLKGESLSATRLADKFYPSILATDAKLGSATAEDAKLCMNRTLDPSKVKGKIVICLRGINARVDKGEQALLAGAVGMVLVNDKINGNEVIADPHVLPATHITFSDGLALFNYINSSKSPVVYITHPTTRLHTKPAPFMAAFSSKGPNTIVPEILKPDITAPGVSVIAAYTEAEGPTNQEFDYRRIPYNSVSGTSMSCPHISGIAGLLKTLHPSWSPAAIKSAIMTTATTLDNEAEPILNATESQATPFSYGAGHVQPNKAMDPGLVYDTTVNDYLNFLCALGYDETQISVFSKAPHPCHKNFSLINLNYPSITVPNLSGSVTVTRTLKNVGSPATYIARVQNPNGITVSVKPNILEFKNVGEEKRFEIRLKVRKGKGKEKYVFGKLIWSDGKHYVKSPIVVKAH 772
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01882 772 PANTHER PEPTIDASE S8 16 771 - -
Car05g01882 772 CDD Peptidases_S8_3 114 596 IPR034197 -
Car05g01882 772 Pfam PA domain 404 477 IPR003137 -
Car05g01882 772 Pfam Peptidase inhibitor I9 30 116 IPR010259 -
Car05g01882 772 PRINTS Subtilisin serine protease family (S8) signature 144 163 IPR015500 -
Car05g01882 772 PRINTS Subtilisin serine protease family (S8) signature 221 234 IPR015500 -
Car05g01882 772 PRINTS Subtilisin serine protease family (S8) signature 559 575 IPR015500 -
Car05g01882 772 Gene3D - 355 498 - -
Car05g01882 772 ProSiteProfiles Serine proteases, subtilase domain profile. 120 629 - -
Car05g01882 772 Gene3D Peptidase S8/S53 domain 146 642 IPR036852 GO:0004252|GO:0006508
Car05g01882 772 Pfam Subtilase family 144 620 IPR000209 GO:0006508|GO:0008236
Car05g01882 772 ProSitePatterns Serine proteases, subtilase family, serine active site. 560 570 IPR023828 -
Car05g01882 772 Gene3D - 646 772 - -
Car05g01882 772 Pfam Fibronectin type-III domain 674 769 IPR041469 -
Car05g01882 772 CDD PA_subtilisin_like 361 491 - -
Car05g01882 772 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 20 116 IPR037045 -
Car05g01882 772 SUPERFAMILY PA domain 413 486 IPR046450 -
Car05g01882 772 SUPERFAMILY Subtilisin-like 115 633 IPR036852 GO:0004252|GO:0006508
Car05g01882 772 PANTHER SUBTILISIN-LIKE PROTEASE SBT5.4 16 771 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01882 Car-Chr5 63948981 63955263 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01882 5 770 Subtilisin-like Serine Gene Family AT2G04160 63.684 0.0 996
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01882 - - gmx:100794807 1246.49