Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01881 ATGAAGAGGGCTATCTCGGTAGGGTCCTTAGAGGGAAGAGGTGTCATAGAACTAGAAAACGCAAGCCTACTTAGTCCTTCATTTCCTAGAAAAGATGCACCCTTTGTCAAAGATTCACCAATTGATCATGAGTGTCAGAATTTTTCACAAGATGTAATTAGAAGTAAGGTGCTAAGTAGCATTAAAGTTGTAGTCTTCTCAACCAAGATAAACTTACTCATGCCTTTTGGCCCCCTGGCAATTTTGATTGATAAATTGTTTCATAGTCATGGTTGGGTCTTTCTTTTCAGCTTATTAGGCATTATACCCTTGGCAGAACGTTTAGGCTATACAACAGAGCAACTAGCTTTCTTTACTGGACCTGCAGTTGGTGGTCTTTTATATGCCACATTTGGAAATGCAACAGAGCTAATTATATCAATTCATGCACTCAAAAGTGGCTTGATTCGTCTAGTTCAACAATCACTACTGGGGTCAATTTTGTCTAACTTGTTGCTAGTGCTTGGATGTGCATTATTTGCTGGTGGATTAGTATTTCATAAGAGAGAACAAGTATTTAACCATGCAGATGCTGCGGTGGATTTCGGATTATTATTGATGGCGGTAATGGGCCTGTTATTTCCAGCAGTTCTCCACGCTACACACACAGAAATAGAATATGGAAAATCTCAGTTATCTCTTTCAAGATTTACTAGTTGCATTATGCTTGTGGCTTATGCTTCCTATATAGTGTTTCAAGTGAAGAGTCAAAAGAATTTACAAGTTCCAGTTGATGAGGACAAGAGTTTCAATGAAGATACTTCAAATGATGCAGAAGTTCCTGAGATCTCTATGTGGGAATCAATGATATGGATTTCAATCTTAACAGGAGGTATATCTATCCTGTCAGAATACTTGGTTAGCACCATAGAGGGGGCATCAAAAGAGTTTCAAATGCCTGTGGCATTTCTTAGTGTTATTCTTCTTCCACTAGTTGGGAATGCTGCAGAGCATGTTGGATCTGTTATGTTTGCTGTCAAAGACAAACTTGACATATCGCTGGGCGTGGCTGTAGGATCTTCAATACAAATATCAATGTTTGTGATTCCACTTTGTGTTGTGGTTGGATGGATGATTGAATGCCCTATGGACTTGAATTTTCAGCCTTTTGAGACAACTTCACTTTTCATGTCAGTTATCATAGTTGCCTTCATGTTGCACAATGGAACTTCGAACTACTTCAAAGGGATGGTGCTCATTCTTTGCTATTTGATAGTTTCTGCAAGTTTTTATGAACATATTGATCCCATGTCAATTGAAGATAATCCCTCAATTGCTGGTCCGTAA 1326 0.3869 MKRAISVGSLEGRGVIELENASLLSPSFPRKDAPFVKDSPIDHECQNFSQDVIRSKVLSSIKVVVFSTKINLLMPFGPLAILIDKLFHSHGWVFLFSLLGIIPLAERLGYTTEQLAFFTGPAVGGLLYATFGNATELIISIHALKSGLIRLVQQSLLGSILSNLLLVLGCALFAGGLVFHKREQVFNHADAAVDFGLLLMAVMGLLFPAVLHATHTEIEYGKSQLSLSRFTSCIMLVAYASYIVFQVKSQKNLQVPVDEDKSFNEDTSNDAEVPEISMWESMIWISILTGGISILSEYLVSTIEGASKEFQMPVAFLSVILLPLVGNAAEHVGSVMFAVKDKLDISLGVAVGSSIQISMFVIPLCVVVGWMIECPMDLNFQPFETTSLFMSVIIVAFMLHNGTSNYFKGMVLILCYLIVSASFYEHIDPMSIEDNPSIAGP 441
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01881 441 Pfam Sodium/calcium exchanger protein 92 247 IPR004837 GO:0016021|GO:0055085
Car05g01881 441 Pfam Sodium/calcium exchanger protein 283 419 IPR004837 GO:0016021|GO:0055085
Car05g01881 441 TIGRFAM caca2: calcium/proton exchanger 57 423 - -
Car05g01881 441 Gene3D - 121 259 IPR044880 -
Car05g01881 441 Gene3D - 267 424 IPR044880 -
Car05g01881 441 TIGRFAM cax: calcium/proton exchanger 74 424 IPR004798 GO:0006816|GO:0015369
Car05g01881 441 PANTHER VACUOLAR CALCIUM ION TRANSPORTER 6 435 IPR004713 GO:0006812|GO:0008324|GO:0016021
Car05g01881 441 PANTHER VACUOLAR CATION/PROTON EXCHANGER 6 435 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01881 Car-Chr5 63943597 63948561 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01881 17 429 Antiporters AT3G13320 62.019 0.0 528
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01881 K07300 - jre:109000743 558.14