Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01872 ATGGGATTCACAAAAAATATGAAACTATATTTAGTGTTTTCTATCTTGATCCTCATTGCAATCCCAACTCTAGTAGTTGCAGAATGCACATGTGATGAAGAAGATGAAGATAGGAACAAATCCAAAGCACTACGTTACAAAATTGCAGCTTTAGTATCAATACTAGTTGCAAGTACAATTGGTGTTTGTATTCCACTTCTTGGAAAAGTGATACCTGCATTAAGTCCCGAAAAAGATATATTTTTTATAATAAAAGCATTTGCTGCTGGTGTTATATTGTCCACTGGTTTCATTCATGTTCTTCCTGATGCTTTTGAGAATCTTACTTCTCCTTGTTTAAAGGAACATCCTTGGGGTGATTTCCCTTTCACTGGTTTTGTAGCTATGTGCACTGCTATGGGGACTCTTATGGTTGATACTTATGCAACTGCTTATTTTCAAAAACACCATTCTAAGAAAACACCCACCACACAAGTTGATTGTGAGACAAACCCTGAAGTGGATGGACACATAGATCTTCATACTCATGTATCACATGGTCATGCACATGGCCATGTTCCTTTCGATAACTCCTCAGAACTTCTTCGCCATAGGGTCATATCACAGGTGTTGGAGTTGGGGATCATTGTTCACTCTATAATAATAGGAATTTCTTTGGGTGCTTCAGAAAGTCCTAAAACCATAAGGCCACTAGTAGCTGCATTAACTTTTCATCAATTTTTTGAAGGCATGGGACTTGGAAGTTGTATAACTCAGGCAAATTTCAAGAGTGTATCAATTACAATAATGGGATTGTTTTTTGCTTTGACTACTCCAGTAGGGATTGGAATTGGTTTAGGAATCAGCAGTGTTTATGATGAGAATAGTCCAACTGCCCTTATTGTTGAAGGAATCTTCAATGCAGCTTCATCTGGAATATTAATATATATGGCACTTGTTGATCTTCTTGCAGCTGATTTTATGAATCCAAGGATGCAAAAAAGTGGTAGACTTACATTAGGATGCAATGTATCTCTTCTACTAGGAGCTGGTTGTATGTCACTAATAGCCAAATGGGCTTAG 1062 0.3729 MGFTKNMKLYLVFSILILIAIPTLVVAECTCDEEDEDRNKSKALRYKIAALVSILVASTIGVCIPLLGKVIPALSPEKDIFFIIKAFAAGVILSTGFIHVLPDAFENLTSPCLKEHPWGDFPFTGFVAMCTAMGTLMVDTYATAYFQKHHSKKTPTTQVDCETNPEVDGHIDLHTHVSHGHAHGHVPFDNSSELLRHRVISQVLELGIIVHSIIIGISLGASESPKTIRPLVAALTFHQFFEGMGLGSCITQANFKSVSITIMGLFFALTTPVGIGIGLGISSVYDENSPTALIVEGIFNAASSGILIYMALVDLLAADFMNPRMQKSGRLTLGCNVSLLLGAGCMSLIAKWA 353
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01872 353 Pfam ZIP Zinc transporter 46 350 IPR003689 GO:0016020|GO:0030001|GO:0046873|GO:0055085
Car05g01872 353 PANTHER ZINC/IRON TRANSPORTER 19 353 - -
Car05g01872 353 PANTHER ZINC TRANSPORTER 1 19 353 - -
Car05g01872 353 TIGRFAM zip: ZIP zinc/iron transport family 29 353 IPR004698 GO:0005385|GO:0016021|GO:0071577
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01872 Car-Chr5 63888728 63891411 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01872 27 353 Inorganic Solute Cotransporters AT3G12750 56.928 5.51e-132 379
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01872 K14709 - gmx:547695 558.14