Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01859 ATGGCGCAGCTCCTCGCGAAGCTGGCGCTAATCGTGACGACTTTCACGTTCCTCTTCTCTCCGTCGCACTCCGCGGTTTTCAGCGTAGATCTAGGCTCCGAATCGCTCAAAGTAGCGGTTGTAAACCTAAAACCCGGTCAAAGTCCGATCTCAATCGCGATCAACGAAATGTCGAAGCGTAAATCGCCGGTGTTAGTTTCATTCCACGACGGCAACCGTCTCCTCGGCGAGGAAGCGGCAGGTTTAGTCGCCCGGTATCCTCAAAAAGTTTATTCGCAAATGAGAGACCTAATAGGTAAACCCTACGCTTCTGCTAAGAACTTTTTAGATTCATTGTACTTACCTTTCGAAGCGAAGGAAGATTCTTCGAGAGGCACTGTTAGTTTCGTAGTAGACAAAAACGGAACAGAGTATTCGCCTGAGGAATTGGTAGCTATGGCTTTGAGTTACGCGGCAAATTTGGCTGAGTTTCATTCGAAGATTCCGATCAAAGACGCTGTGATTGCTGTTCCACCTTATTTTGGACAAGCTGAACGGAGAGGGTTGCTTCAGGCTGCGGAGTTAGCGGGAATTAATGTTCTTTCGTTGATTAACGAGTACTCTGGCGCAGCGTTGCAGTATGGGATTGATAAGGATTTCTCAAATGAGTCAAGGCATGTTATTTTCTATGACATGGGTTCTAGTAGTACCTATGCCGCACTTGTTTATTTCTCATCTTATAAAAGTAAAGAGTATGGGAAGACAGTGTCGGTGAACCAGTTTCAGGTCAAGGATGTACGTTGGAACCCTGAGTTGGGTGGTCAGCATATGGAAATGCGATTGGTAGAATATTTTGCTAACGAATTCAATGCACAACTTGGTGGTGGATTAGATGTGAGAAAATTTCCCAAGGCTATGGCTAAGTTAAAGAAACAGGTTAAACGAACAAAAGAAATTCTTAGCGCTAACACTGCAGCTCCCATTTCAGTTGAGTCGTTTCATGGTGAAGTGGATTTCAGGAGCACCATAACCCGTGAGAAATTTGAAGAGCTTTGTGAAGATATTTGGGAAAAATCTCTGTTACCATTGAAAGAGTTGCTTGAGCATTCAGGCCTGTCAGCAGATCAAATATATGCAGTGGAGTTGATTGGAGGTTCTACCAGAGTGCCAAAATTGCAGGCTAAACTTCAAGAGTTCCTTGGTAGGAAAGAACTTGATAGGCATCTTGACGCTGATGAAGCAATAGTTCTTGGTGCTGCTTTGCATGCTGCAAATATAAGTGATGGAATCAAATTAAACCGTAAACTAGGAATGATCGATGGTTCCTTATATGAGTTTGTGGTTGAGTTGAATGGTCCTGATTTTTTGAAAACTGAAAGTTCAAGGCAGTTACTTGTACCACGAATGAAGAAACTCCCGAGTAAGATGTTCAGATCCATCAATCATGACAAAGATTTTGAACTTTCACTTGCTTATGAAAGTGAACATCATTTGCCACCTGGTGTTACCTCTCCCTTAATTGCTCAATACGAGATATCTGGTTTAACAGATGCAAGTGGGAAATACTCTTCTCGGAATCTTTCGTCCCCCATTAAGGCAAACGTACATTTCTCTCTTAGTAGAAGTGGAGTTCTTTCTCTGGATCGGGCAGATGCTGTTATTGAAATAACAGAGTGGGTGGAAGTTCCCAAGAAGAACTTGACTATAGAGAATTCAACCATTTCGTCAAATGTATCAGATGAATCTGGTGCTAAGAGCAATACTGAGGAAAACAATGAAAGTATGCAAAGTGATGGTGGTAATAGTAAGACATCCAACGCGAGTGCAGAGGAGCAAGCTGCCGCTGAACCTGCTACAGAGAAAAAGCTGAAAAAGCGGACCTTTAGGGTACCACTAAAGATTGTTGAGAAGATAACAGGACCAGGGTTGTCTCTATCGAAAGATTTTCTTGCCGAAGCTAAAAGAAAATTACAAGCACTAGACAAACAAGATGCAGAAAGGAAAAGAACGGCCGAGTTTAAAAATAATTTAGAAGGATATATATACACTACTAAGGAAAAGATTGAAACTCTTGAGGAATTTGAAAAAGTTTCTACCAGTGAGGAACGCCAGTCCTTTGTTGAGAAGCTTGATGAGGTGCAAGATTGGTTATATACAGATGGTGAAGATGCCAACGCTACAGAATTTCAAGAGCGTCTAGATCAGTTAAAAGCCGTTGGAGACCCAATTTTCTTCCGGTTAAAAGAGCTTACCGCTCGACCAGAGGCAGTTGAGCATGCCCATAAATACATTGATGAGCTGAAACAGATTGTGGAAGAGTGGAAAGCAAAGAAGTCTTGGCTTCCAAAAGAACGAGTAGATGAGGTGATTAATGATGCGGAAAAGTTAAAGAAGTGGTTGGATGAGAAAGAAACTGAGCAAAAGAAGACTTCTGAATTCAGTAAGCCTGCCTTTACAtctgaagaagtatattcaaaggtgtttggtctacaaagcaagGTTGCCAGTATTAATAGAATCCCCAAGCCCAAGATTCAGAAGTCCACAAAGAACGAAACTGAGAGCAATGAGCAGAATACTGATAGTTCTACCTCAACTGATAGTTCCTCTCAAAGTGATCAATCAGAAAGCCAGAGTGAAGAAACGGTTGATGAGCAACCCAAAAGTCATGATGAGTTATGA 2661 0.4149 MAQLLAKLALIVTTFTFLFSPSHSAVFSVDLGSESLKVAVVNLKPGQSPISIAINEMSKRKSPVLVSFHDGNRLLGEEAAGLVARYPQKVYSQMRDLIGKPYASAKNFLDSLYLPFEAKEDSSRGTVSFVVDKNGTEYSPEELVAMALSYAANLAEFHSKIPIKDAVIAVPPYFGQAERRGLLQAAELAGINVLSLINEYSGAALQYGIDKDFSNESRHVIFYDMGSSSTYAALVYFSSYKSKEYGKTVSVNQFQVKDVRWNPELGGQHMEMRLVEYFANEFNAQLGGGLDVRKFPKAMAKLKKQVKRTKEILSANTAAPISVESFHGEVDFRSTITREKFEELCEDIWEKSLLPLKELLEHSGLSADQIYAVELIGGSTRVPKLQAKLQEFLGRKELDRHLDADEAIVLGAALHAANISDGIKLNRKLGMIDGSLYEFVVELNGPDFLKTESSRQLLVPRMKKLPSKMFRSINHDKDFELSLAYESEHHLPPGVTSPLIAQYEISGLTDASGKYSSRNLSSPIKANVHFSLSRSGVLSLDRADAVIEITEWVEVPKKNLTIENSTISSNVSDESGAKSNTEENNESMQSDGGNSKTSNASAEEQAAAEPATEKKLKKRTFRVPLKIVEKITGPGLSLSKDFLAEAKRKLQALDKQDAERKRTAEFKNNLEGYIYTTKEKIETLEEFEKVSTSEERQSFVEKLDEVQDWLYTDGEDANATEFQERLDQLKAVGDPIFFRLKELTARPEAVEHAHKYIDELKQIVEEWKAKKSWLPKERVDEVINDAEKLKKWLDEKETEQKKTSEFSKPAFTSEEVYSKVFGLQSKVASINRIPKPKIQKSTKNETESNEQNTDSSTSTDSSSQSDQSESQSEETVDEQPKSHDEL 886
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01859 886 CDD HYOU1-like_NBD 28 417 - -
Car05g01859 886 Gene3D - 212 399 - -
Car05g01859 886 PANTHER HSC70CB, ISOFORM G-RELATED 11 870 - -
Car05g01859 886 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 427 569 IPR029047 -
Car05g01859 886 SUPERFAMILY Actin-like ATPase domain 217 418 IPR043129 -
Car05g01859 886 ProSitePatterns Heat shock hsp70 proteins family signature 3. 373 387 IPR018181 -
Car05g01859 886 Pfam Hsp70 protein 27 738 IPR013126 GO:0005524|GO:0140662
Car05g01859 886 MobiDBLite consensus disorder prediction 566 615 - -
Car05g01859 886 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 665 748 IPR029048 -
Car05g01859 886 MobiDBLite consensus disorder prediction 566 605 - -
Car05g01859 886 MobiDBLite consensus disorder prediction 832 886 - -
Car05g01859 886 MobiDBLite consensus disorder prediction 845 870 - -
Car05g01859 886 Gene3D Actin; Chain A, domain 4 266 351 - -
Car05g01859 886 Gene3D - 92 146 - -
Car05g01859 886 Gene3D - 638 752 IPR029048 -
Car05g01859 886 PANTHER BNAC07G50110D PROTEIN 11 870 - -
Car05g01859 886 Gene3D - 29 417 - -
Car05g01859 886 PRINTS 70kDa heat shock protein signature 25 38 - -
Car05g01859 886 PRINTS 70kDa heat shock protein signature 57 69 - -
Car05g01859 886 PRINTS 70kDa heat shock protein signature 166 186 - -
Car05g01859 886 PRINTS 70kDa heat shock protein signature 370 386 - -
Car05g01859 886 PRINTS 70kDa heat shock protein signature 402 422 - -
Car05g01859 886 PRINTS 70kDa heat shock protein signature 500 516 - -
Car05g01859 886 SUPERFAMILY Actin-like ATPase domain 24 211 IPR043129 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01859 Car-Chr5 63766783 63775908 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01859 27 544 Calmodulin-binding Proteins AT3G12580 28.762 2.22e-61 218