Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01852 ATGGATTCTGAAACTGATGATGTTGGTGTTGTGGAGAAAGATCCAACTTTGCGTTACGCACGTTATGATGAAATGTTAGGGAAAGGAGCCTTCAAGACTGTATATAAAGCTTTTGATGAAGTAGATGGAATAGAAGTTGCTTGGAACCAAATTAGTATAGACGATGTTGTGCAGTCACCTCAAAATTTGGAAAAGTTGTATTCTGAGGTTCATCTCCTCAAATCGCTGAAACACGAAAATATCATTAAGTTGTATAGTTCTTGGGTGGATGAAAAGAGCAGGACTATCAACATGATAACTGAATTGTTCACCTCTGGGAGTTTGAGGCAGTATCGGAAGAAACATAAGAATGTGGATATGAAGGCTATCAAGAACTGGGCGAGGCAGATTCTTCGTGGCTTGTGCTTTCTGCACAGTCACAGTCCTCCTATTATTCATAGGGATCTAAAATGTGATAACATTTTTGTTAATGGGAACAATGGGCAAGTTAAGGTTGGAGATCTTGGAATGGCAATTGTCATGCAGCAGCCTACTGCCAGGAGTGTTATTGGTACTCCGGAATTCATGGCTCCTGAGCTTTATGAGGAAGAATATAATGAACTTGTTGACATATATTCCTTTGGCATGTGTATTCTTGAAATGATCACCTGCGAGTACCCGTATAGCGAATGCAAAAATCCGGCGCAGATATATAAGAAAGTTACATCTGGTATAAAGCCTGCTGCTCTTGCTAAAGTGAATGATCCTGAAGTGAAGCAATTTATAGAGAAATGTTTAGTTCCAGCATCTATGAGATTGCCTGCATCTGAACTTCTCAAAGACCCATTCCTTGCAACTGGAAACACAAAGGAGATCTATCGTGATACCCTGCTGCTGCCTAATCTGCCCACTAAATCAATTAATCTACCAACTTTTGAAGCACATCCTATGGAGATAGATTCAAACTCCAGGCATACATCACCTGGCTCCTCTGTGGAAAGAGTTAAAGAAACTTCTCAAGTTTCAATTCTCGACCTCCTAAGGAAGACAGAGAACAATGAATTTAGGTTAAGAGGGGAGAAAAATGCTGAAAGTACAATCTCACTTACACTCCGAATTGCCGATGCTCATGGTGGAGCAAGGAATATCCATTTTCCATTCTACATCAATTCTGACACGCCAATTTCAATTGCTGAGGAGATGGTGGAACATCTGGAACTCAAGGATGCGGATGTAGCTGTCATTGCTGAGCTAATACACAACATGATTTTTGAGCTTGTGCCTAACTGGAAACCCGTATGTCAGAACCTCTCATCTGGAACAGATAATTTGTACAGGCATTCGGAAGCTCAGAATGGTGAACAGTTAAACTGCCATTGGACATTGGGATCAAGTAATTTTGATGCGAAGACAATTTCTGAGGATTTAGGTCACTCACAGCTTGATGGGGAAGATCAAGACAAACAAGAATCTATTTCATCAGATATTTCTGCCGAGTATGAGATTGCAATTGCCACGAATTCTAAAGGTGTAGAGCCTGATTGTTTTATTCTTCATGAATGTTGCAAGGGATCCAATGGCTTAAATTCGAATTCAGATGTCCGGATTTGTGATCAAGAAGATGGAAACAATAATCAATCATATAACTTCGCAGGCTCTTTAATTGATTCATGTTGCAGTCCATCCATGAACCTTGAGATGTCCAGCAAATGTTCTCTTACTCCACGTGACAAAGATCATTTAAACGAGCTACATTTGGAGCTTGAAGCAATTGAAACCCAGTATCAACAATGTTTTCGTGAGCTTGAGAAGATGAAGGAGGAAGCCATAGAAAATGTCAAAAAGAGATGGATGACAAAGAAAAAAATATCAGTTATGTGA 1860 0.3989 MDSETDDVGVVEKDPTLRYARYDEMLGKGAFKTVYKAFDEVDGIEVAWNQISIDDVVQSPQNLEKLYSEVHLLKSLKHENIIKLYSSWVDEKSRTINMITELFTSGSLRQYRKKHKNVDMKAIKNWARQILRGLCFLHSHSPPIIHRDLKCDNIFVNGNNGQVKVGDLGMAIVMQQPTARSVIGTPEFMAPELYEEEYNELVDIYSFGMCILEMITCEYPYSECKNPAQIYKKVTSGIKPAALAKVNDPEVKQFIEKCLVPASMRLPASELLKDPFLATGNTKEIYRDTLLLPNLPTKSINLPTFEAHPMEIDSNSRHTSPGSSVERVKETSQVSILDLLRKTENNEFRLRGEKNAESTISLTLRIADAHGGARNIHFPFYINSDTPISIAEEMVEHLELKDADVAVIAELIHNMIFELVPNWKPVCQNLSSGTDNLYRHSEAQNGEQLNCHWTLGSSNFDAKTISEDLGHSQLDGEDQDKQESISSDISAEYEIAIATNSKGVEPDCFILHECCKGSNGLNSNSDVRICDQEDGNNNQSYNFAGSLIDSCCSPSMNLEMSSKCSLTPRDKDHLNELHLELEAIETQYQQCFRELEKMKEEAIENVKKRWMTKKKISVM 619
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01852 619 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 1 614 - -
Car05g01852 619 SUPERFAMILY Protein kinase-like (PK-like) 23 325 IPR011009 -
Car05g01852 619 ProSiteProfiles Protein kinase domain profile. 20 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01852 619 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 360 416 IPR024678 GO:0004674|GO:0005524
Car05g01852 619 Gene3D - 358 450 - -
Car05g01852 619 PANTHER WNK KINASE 1 614 - -
Car05g01852 619 ProSitePatterns Serine/Threonine protein kinases active-site signature. 144 156 IPR008271 GO:0004672|GO:0006468
Car05g01852 619 Coils Coil 574 601 - -
Car05g01852 619 Pfam Protein kinase domain 23 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01852 619 SMART serkin_6 20 277 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01852 619 Gene3D Transferase(Phosphotransferase) domain 1 103 284 - -
Car05g01852 619 CDD STKc_WNK 18 277 - -
Car05g01852 619 Gene3D Phosphorylase Kinase; domain 1 3 101 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01852 Car-Chr5 63681984 63685239 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01852 3 618 MAP Kinase Kinase Kinase AT5G41990 51.948 0.0 571
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Car05g01852 Pkinase 4.9e-52 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01852 K08867 - gmx:100783717 912.909