Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01830 ATGGACATGAATCAAAGATTGCAAATTCTTGTTTCAGAAATTGCATGGGGAAGCAAGTGGCAGATGATGCTGTTAGCAAAATCAGAACGGAGAAATGAAAGTGGAAAATCTACTACGATCGCATTATTACAAAGATTCTATGATCCAGATTCAGGTCACATTACAGTTGATGGAATTGAAATCCAAAAGCTTCAGTTTAAATGGTTAAGGCAGAAAATGTGCTTGGTAAGCCAAGAGCCTGTGTTGTTTAATGACACACGAGCTAATATCGCATATGGAAAGGGAAATATGCAACAAAGGCAGGCACCATTGCTGCAGCTAAAATGGCAAATGCACACAAGTTCATTGGTAGTTTGCAGCAGATTATCTTGTCGACAGAAGCAGCGCATGGCATTTGCAAGCACAATAATGAAGAATCCAAAAATATTACTACTGGATGAAGCCACCAGTGACCTTAATGAGCTAAGGGACGCCAAAGGAGGTTGGTATCAAACATAA 498 0.3976 MDMNQRLQILVSEIAWGSKWQMMLLAKSERRNESGKSTTIALLQRFYDPDSGHITVDGIEIQKLQFKWLRQKMCLVSQEPVLFNDTRANIAYGKGNMQQRQAPLLQLKWQMHTSSLVVCSRLSCRQKQRMAFASTIMKNPKILLLDEATSDLNELRDAKGGWYQT 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01830 165 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 34 155 IPR027417 -
Car05g01830 165 PANTHER ATP-DEPENDENT PERMEASE MDL1, MITOCHONDRIAL 33 152 - -
Car05g01830 165 Gene3D - 121 152 IPR027417 -
Car05g01830 165 Gene3D - 34 100 IPR027417 -
Car05g01830 165 PANTHER - 33 152 - -
Car05g01830 165 Pfam ABC transporter 32 150 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01830 Car-Chr5 63464428 63466243 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01830 34 153 Calmodulin-binding Proteins AT2G36910 41.667 4.08e-25 99.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01830 K05658 - cit:102627423 138.272