Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01821 ATGGAACAACTCAGATTCACCTCCTTCTTATTCTTCTCCTCCTTACTATTTTCAATCCCTTTCATCTCAGAATCCAAATGCACAAAAGGTTGTTCACCAGCTTTAGCCTCCTACTACCTAAATTCAGGCGCCAACCTCACACATATTTCAGGTATCTTCTCATCTTCGATTCTCACAAAACCCGAAGACATAGTCGATTACAACCAAGACACAATAGCCAACAAAGACACCATTATAGCTGGTAAAAGAATCAACATTCCGTTTCCATGTGATTGCATCGCCGGCGAGTTTCTCGCTCACACGTTTAGTTACGATGTTCAAACGGGTGACACGTACGAAACCGTTGCTACGAACAATTACGCTAACCTAACCAATGTTCAGTGGTTGCAAAGGTTCAATAGTTATCCAGCTAATAACATTCCTGATACTGGAACGCTTAATGTTACTGTAAATTGTTCTTGTGGGAACAGTGATGTTGCCAATTATGGTTTGTTTCTTACTTACCCTCTTAGACCTGGTGAGACTTTGGGGTCTGTGGCAAATTCATCCAACATTGATTCTTCCTTGCTGCGGAGTTATAATCCCGGTGTTAATTTCAATCAAGGGAGTGGTCTCGTTTTTATTCCTGGCAAAGATCAGAAGGGTAACTTTGTGTTTTTGAGCTCCAGTTCAGGAGGTCTTGGTAGTGGGGTTATTGCTGGGATAGCTGTTGGTATAGTGGTTGTTCTTCTGTCATTGGCGGTTGCTATATATTTTGGAATCTTCCGGAAGAAGAAGATACAGAAAGAGGAACTTCTTTCGCGAGATTCCACTGCACTATTTTCTCGAGGTAGGATGGATGAAAATTCTCATGGTGCTGCTAATGTAACGACAAGGCATGGTGTTCCTGCTGCTATCACTGGCATAACAGTGGACAAATCAGTTGAATTCTCATATGATGAACTAGCAGCTGCCTCAGATAACTTTAGCTTGGCTAATAAAATTGGTCAAGGAGGTTTTGGCTCTGTCTACTATGCAGAGCTAAGGGGAGAGAAAGCTGCAATCAAGAAGATGGATATGCAAGCATCGAAAGAGTTTCTTGCTGAATTGAAAGTCCTTACACGTGTTCATCATCTTAACTTGGTGCGGTTGATTGGATATAGTATTGAGGGGTCTCTTTTCCTTGTCTACGAATTCATTGAGAATGGAAACTTGAGTCAACATTTGCGCGGTTCAGGTAGAGATCCACTGCCATGGGCTACACGTGTGCAGATTGCTTTGGATTCTGCCAGAGGTCTTGAATATATCCATGAGCATACAGTTCCTGTATATATTCACCGCGACATAAAGCCAGCAAATATATTGATAGATAAAAACTTCCGGGGAAAGGTTGCTGATTTTGGATTGACCAAATTGACGGAAGTTGGAAGCTCATCACTTCCAACAGGTCGTCTTGTTGGCACATTTGGATACATGCCACCGGAGTATGCTCAATATGGAGATGTTTCTCCCAAAGTAGATGTTTATGCCTTCGGAGTTGTTCTTTATGAACTTATTTCGGCGAAGGAAGCTATTGTCAAGACAAATGAATCTGTTGCTGCAGACTCAAAGGGACTTGTAGCTCTGTTTGAAGGAGTTCTTAGTCAACCTGATCCTACAGAAGATCTTCACAAACTAGTGGATCCAAGACTAGGGGATACCTACCCTGTAGATTCGGTTCGCAAGATGGCTCAACTAGCCAAAGCGTGTACACAAGAAAATCCTCAACTGCGTCCGAGTATGAGATCAATTGTGGTTGCTCTTATGACACTTTCTTCAAGTACAGACGATTGGGATGTTGGTTCCTTTTACGAAAATCAAAACCTTGTGAATCTTATGTCAGGAAGATAG 1869 0.4211 MEQLRFTSFLFFSSLLFSIPFISESKCTKGCSPALASYYLNSGANLTHISGIFSSSILTKPEDIVDYNQDTIANKDTIIAGKRINIPFPCDCIAGEFLAHTFSYDVQTGDTYETVATNNYANLTNVQWLQRFNSYPANNIPDTGTLNVTVNCSCGNSDVANYGLFLTYPLRPGETLGSVANSSNIDSSLLRSYNPGVNFNQGSGLVFIPGKDQKGNFVFLSSSSGGLGSGVIAGIAVGIVVVLLSLAVAIYFGIFRKKKIQKEELLSRDSTALFSRGRMDENSHGAANVTTRHGVPAAITGITVDKSVEFSYDELAAASDNFSLANKIGQGGFGSVYYAELRGEKAAIKKMDMQASKEFLAELKVLTRVHHLNLVRLIGYSIEGSLFLVYEFIENGNLSQHLRGSGRDPLPWATRVQIALDSARGLEYIHEHTVPVYIHRDIKPANILIDKNFRGKVADFGLTKLTEVGSSSLPTGRLVGTFGYMPPEYAQYGDVSPKVDVYAFGVVLYELISAKEAIVKTNESVAADSKGLVALFEGVLSQPDPTEDLHKLVDPRLGDTYPVDSVRKMAQLAKACTQENPQLRPSMRSIVVALMTLSSSTDDWDVGSFYENQNLVNLMSGR 622
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01821 622 Gene3D Transferase(Phosphotransferase) domain 1 393 613 - -
Car05g01821 622 ProSiteProfiles Protein kinase domain profile. 322 597 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01821 622 Gene3D Phosphorylase Kinase; domain 1 307 392 - -
Car05g01821 622 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-RELATED 7 622 IPR044812 GO:0019199|GO:0045087
Car05g01821 622 PANTHER CHITIN ELICITOR RECEPTOR KINASE 1-LIKE 7 622 - -
Car05g01821 622 CDD STKc_IRAK 328 591 - -
Car05g01821 622 ProSitePatterns Serine/Threonine protein kinases active-site signature. 437 449 IPR008271 GO:0004672|GO:0006468
Car05g01821 622 Pfam Protein tyrosine and serine/threonine kinase 324 593 IPR001245 GO:0004672|GO:0006468
Car05g01821 622 SMART serkin_6 322 596 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01821 622 SUPERFAMILY Protein kinase-like (PK-like) 303 594 IPR011009 -
Car05g01821 622 ProSitePatterns Protein kinases ATP-binding region signature. 328 350 IPR017441 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01821 Car-Chr5 63370270 63377710 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01821 15 622 Receptor kinase-like Gene Family AT3G21630 60.325 0.0 719
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LysM Car05g01821 PK_Tyr_Ser-Thr 1.8e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01821 - K13429 gmx:100777781 938.332