Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01814 ATGGAGCAAATGATGGGTGCTtcttcttcttcttcggcaatatctttgaaattatttgatgtttttattagctttcgaggtgaggatactcgtaaaaaattcacaagtcatctttataatgctatgagcaagaaagttataacctttatagacgacagtgagcttgaaaaaggagatgagatctccttatcattaattaaatcaattgaggagtcacatgcatctatagtcgtcttctcaaaagactatgcttcttcaaaatggtgcttgaatgaactcatcaagattctacaatgcaagaaagatcagggacaaattgtgatacctgttttctacgaagtagatccatcacatgtgaggaatcagattgggacttatgggcaagcctttgcaaaacatgagcgagatttgaagcacaacaaagacaagttgcagaaatggaaaaatgctctcactgaagcagccaatttagctgggtggcactctcaaaatTACAGgattgaatccaacttcattgaagatatcgtcgaagatgttttgaaaaaattgaatcgtagccacccatttaaagttaataaggaacttgttggaattgagaaaaagtatgaagagactaaatcgttattgaaaattgggtcaaatgatgttagaacccttgcattatggggcatgggtggcataggaaagaccactctagctaaagatttatatgctcaattgtgttctcaatttgaacatcattgcttcctcgaaaatgtaagggaagagtcaaccagatgtggactcaatgctgtacgcaacaaacttttttccacattgttggagcttcgtgttgatgcaccttatgtagaaactccaattttcatgagaagacttgcatgtgaaaaaagcttcattgtgttggatgatgtggcaaccttagagcaagcagaaaatcttaacatagataatcaatgcttgggacagggtagtagagtcattataacaactagagataagcagatatgtagtcaatttgatgaatgtgaaatatatgaggtcaaggaattggaccatgatgaatctctccagctattctgtttgaaagcttttggagaaaaacgtcctaaagttggatatgaatatctatcaaaacgagcaatcggctattgcagaggcaatcctttggctttaaaagttttaggtgcacattttcgaacaaaaagcaaagaagcgtgggaaagtgaattggaaaagctaaaaaagattccaaatgggagaattcatgagatgttaaaattgagtttcgatgacttagatcgtactcaacaagacatattcctggatattgcatgcttcttctccctgataggtgagttgtatggggatcgtgagacttgccgagatcacctagtatgtctattggatgcttgcaatttctttgcaacaagtgggattggagtccttttggataaatcactcataacttgtctagatcctaatttcatagacatgcatgatttgttaatagaaatggggctagagattattaagcaagaatctccaaaagaccccggaagaagaagtcgattgtcggatcccgaggaagtgtatgatgtattaaaatataacaagggaactgaagtagttgaagttataatattagatatttctgcagtagcgaatctatacttgagctctgattcctttaaatggatgaccaacttaagatatttgaaaatcacaaatatagcttttgagggaaaaccctactctgtgtacctccctgacgggcttgggtggttgtctgataaattgaggtaccttcattgggatgcatttccacttgagtctttgtcatcaaccttttgttttggaaggcttgtaatacttaacatgtgcaatagcaagcttaaaaagctttgggatggaattcagAAGCTTGACAATTTAAAGATAATTAAGCTTGATGATTCCATAGACCTGATTGAGGTCCCAGACTTATCATGGGCACCAAATATTGAAGTAGTGTCACTTTCTAATTGTGTGAGCTTGTGTCGGCTCCATCCATCCATTTTTGCTGCCCCCAAGCTTACAACTCTTTATTTAGAAGGTTGCGAAAACATTGAAAGCTTGAAAACAAACATTCATTCAAAATCTCTCCAATCACTTGATCTCACTGGTTGTTCATCTCTAGTGGAATTTTTGGTGACATCAGACGAAATGGTTTGGTTGTCCTTAAGTGGAACTGCTATACATGAATTGGCATCATCAATTTGGCACAATAGCAAACTTGTTCATCTCGTTCTATCAAAATGTAAGAAGCTTAACATTGTTGGGAAGAAGTTATCAAATGATCCACGAATGGGGCCTCTTAAAATACTGGACCTTTCTGGATGCACACAAATCAATACGTCGAATCTGTGGTACATCTTTGATGGCCTGCGATCTTTAAAAGAACTCGATTTGAGAAAATGTTGCAATTTAGAAGCTCTCCCTGACAACATCCTAAACAATTCAATGTTGGAAATGCTTCATTTAGATGAATGCAGGAAACTTAAGTCCCTACCAAAGCTTCCTGCATCGTTGCGAGAATTGACAGCCGTTAACTGCACTTATCTGTACACCGACTCCATTCAACGATCCATGCTTGAAAACATGTTACATAGACAACACACCAACTCTGGGTATATATCAAATTATGTTCATGAATTATCTGTACTTCCAGGAGCCCATGTTCCGGGCGAGTTTGATTTTCATAAAACAGAAGCTTCAATAGCTATTCCTCATATTCCAAAATTTGGCCTGTCCGCTTTCATTTTTTGCGTCATTCTTTCTGAGGGCTTAAATGTTAATTACGAAAATGTTCGTTGTACTATCTATGAACATGGAAAAGAAGTACACCAATGTAATGTACGTTGTGGGAGTGGGACATTAATTTCAGACCATGTATTATTGAACTGCTGGTGTGATAACTCTAAATCGGTGGAATTGGGGAGTGAAAGTGGAGGTGATCATTACAACCTTTCATTTGAATTCAAACATTATGTTTATGAAGAGAAACTGTGGTCAACTAAGGGGATAAAGGGTTGTGGGGTCATCAGTGTTTATGGCTTGGAACTTAAGTTAGGGATGGATGGTAAAAACAGTAGCAGAGATGATATCATTGAATTACAGTCCAATGATCAAGTATCTGATGAGTCTGATCAACATTTGAAATTTGATATTGATGAGTTACAACACCGGGCGTTTGGAGCGGAAGTTAGAGGCTCGGACGATAAAAATGAAGATGACCAACAACAGCTTCTTATTCCCCCAAAGAAGAGGAGGATAACTTGA 3318 0.1667 MEQMMGASSSSSAISLKLFDVFISFRGEDTRKKFTSHLYNAMSKKVITFIDDSELEKGDEISLSLIKSIEESHASIVVFSKDYASSKWCLNELIKILQCKKDQGQIVIPVFYEVDPSHVRNQIGTYGQAFAKHERDLKHNKDKLQKWKNALTEAANLAGWHSQNYRIESNFIEDIVEDVLKKLNRSHPFKVNKELVGIEKKYEETKSLLKIGSNDVRTLALWGMGGIGKTTLAKDLYAQLCSQFEHHCFLENVREESTRCGLNAVRNKLFSTLLELRVDAPYVETPIFMRRLACEKSFIVLDDVATLEQAENLNIDNQCLGQGSRVIITTRDKQICSQFDECEIYEVKELDHDESLQLFCLKAFGEKRPKVGYEYLSKRAIGYCRGNPLALKVLGAHFRTKSKEAWESELEKLKKIPNGRIHEMLKLSFDDLDRTQQDIFLDIACFFSLIGELYGDRETCRDHLVCLLDACNFFATSGIGVLLDKSLITCLDPNFIDMHDLLIEMGLEIIKQESPKDPGRRSRLSDPEEVYDVLKYNKGTEVVEVIILDISAVANLYLSSDSFKWMTNLRYLKITNIAFEGKPYSVYLPDGLGWLSDKLRYLHWDAFPLESLSSTFCFGRLVILNMCNSKLKKLWDGIQKLDNLKIIKLDDSIDLIEVPDLSWAPNIEVVSLSNCVSLCRLHPSIFAAPKLTTLYLEGCENIESLKTNIHSKSLQSLDLTGCSSLVEFLVTSDEMVWLSLSGTAIHELASSIWHNSKLVHLVLSKCKKLNIVGKKLSNDPRMGPLKILDLSGCTQINTSNLWYIFDGLRSLKELDLRKCCNLEALPDNILNNSMLEMLHLDECRKLKSLPKLPASLRELTAVNCTYLYTDSIQRSMLENMLHRQHTNSGYISNYVHELSVLPGAHVPGEFDFHKTEASIAIPHIPKFGLSAFIFCVILSEGLNVNYENVRCTIYEHGKEVHQCNVRCGSGTLISDHVLLNCWCDNSKSVELGSESGGDHYNLSFEFKHYVYEEKLWSTKGIKGCGVISVYGLELKLGMDGKNSSRDDIIELQSNDQVSDESDQHLKFDIDELQHRAFGAEVRGSDDKNEDDQQQLLIPPKKRRIT 1105
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01814 1105 MobiDBLite consensus disorder prediction 1080 1105 - -
Car05g01814 1105 SUPERFAMILY Toll/Interleukin receptor TIR domain 9 160 IPR035897 -
Car05g01814 1105 PANTHER RESISTANCE PROTEIN (TIR-NBS-LRR CLASS), PUTATIVE-RELATED 20 1081 - -
Car05g01814 1105 Pfam NB-ARC domain 206 419 IPR002182 GO:0043531
Car05g01814 1105 Coils Coil 130 150 - -
Car05g01814 1105 Gene3D - 15 183 IPR035897 -
Car05g01814 1105 MobiDBLite consensus disorder prediction 1080 1097 - -
Car05g01814 1105 Pfam TIR domain 19 197 IPR000157 GO:0007165
Car05g01814 1105 SMART till_3 18 157 IPR000157 GO:0007165
Car05g01814 1105 Gene3D - 349 433 IPR042197 -
Car05g01814 1105 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 177 443 IPR027417 -
Car05g01814 1105 PRINTS Disease resistance protein signature 218 233 - -
Car05g01814 1105 PRINTS Disease resistance protein signature 291 305 - -
Car05g01814 1105 PRINTS Disease resistance protein signature 384 398 - -
Car05g01814 1105 PRINTS Disease resistance protein signature 709 725 - -
Car05g01814 1105 Gene3D Ribonuclease Inhibitor 733 880 IPR032675 -
Car05g01814 1105 Gene3D Ribonuclease Inhibitor 534 732 IPR032675 -
Car05g01814 1105 ProSiteProfiles TIR domain profile. 17 183 IPR000157 GO:0007165
Car05g01814 1105 Pfam Leucine Rich Repeat 621 639 IPR011713 -
Car05g01814 1105 SUPERFAMILY L domain-like 544 873 - -
Car05g01814 1105 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 20 1081 IPR044974 GO:0006952
Car05g01814 1105 SUPERFAMILY "Winged helix" DNA-binding domain 420 534 IPR036390 -
Car05g01814 1105 Gene3D - 184 345 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01814 Car-Chr5 63303430 63310593 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01814 15 875 WRKY Transcription Factor Family AT4G12020 31.859 5.90e-91 319
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01814 - - mtr:MTR_2g037140 1246.88