Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01808 ATGAGTAAGCTTTCTGTTTATGCTTGTTTACTCAACTTGAGTCTTTTGGTTATTTTTCCTTATAGCAAAGCTAGTCAGGCTGATAAACTTGATGAGTTTATTATGTCAAGAAGCTCACAGAATGCTCCTATGACTTTTTCTTGGGAAGAAAAAGATGAAGTGAAAACATATTCATCTGCTTATGTTGCACCTCAAGAGGGGCTAAGGCTAGCTGATAAAATTGACACATTGCCTGGTCAACCTTATGGAGTTGATTTTGACCATTACTCTGGCTATGTCACTGTTGATCCTAAGGCTGGAAGAGAACTTTTCTATTATTTTGCTGAGTCTCCATATTTCCCTTCATCTAAACCTTTAATATTGTGGCTAAATGGAGGACCTGGTTGTTCCTCACTGGGATATGGAGCCTTTGAGGAGCTAGGACCCTTCAGAGTAAACTCTGATGGAAAAACACTATACCGTAACAAATATGCTTGGAATGAAGTGGCAAATGTGCTCTTCTTGGAGTCCCCAGCAGGAGTAGGATTTTCCTACTCAGACACTACTTCTGACTATGACAAATCAGGAGATAAAAGAACTGCCAATGATGCCTATGTCTTCCTTATCAACTGGCTGGAGAGGTTTCCACAGTACAAAACCAGAGATTTTTACATAACTGGAGAGAGTTATGCTGGTCACTATGTTCCTCAGCTAGCATACACTATTCTTTCCAACAATAAACTCTATAACAAAACCATTATTAACCTCAAAGGAATTTCAATAGGAAATGCATGGATTGATGATGCAACAAGTTTGAAGGGGTTATATGATTACTTTTGGACTCATGCTTTGAACTCAGATCAAACTCATGAGCTGATTGATAAGTACTGTGACTTCACTTCCGAAAAAATTTCAGCAATTTGTGTCAATGCAACAGAAAAGGCCTTAATTGAGAAAGGACACATAGACTTCTATAACATCTATGCTCCACAGTGTCATGACTCTTCTCTCAAAAATGGTTCCACTGGTTCTGTATATGAATTTGACCCTTGTTCTGATAACTATGGTATTGCCTATCTAAATAGACCAGAGGTCCAAAAGGCTCTTCATGCAAAACCTACAAATTGGACCCATTGCAGCGATGTGATTTTGAAATGGAACGACAGCCCAGTTACCATACTACCCACCATCAAGTATCTCATTGATAGTGGCATTAAATTATGGATATACAGTGGTGATACAGATGCAAGGGTTCCAGTCACATCTTCAAGGTATTCAATTAACACCCTCAAGCTCCCTATCACAGCCGCTTGGCGTCCATGGTATTCCGGAAAAGAGGTTGGAGGATATGTGGAGGGATACAAAGGATTGACATTGGTTACGGTGAGAGGAGCTGGACATCTTGTTCCAAGTTGGCAACCAGCACGGGCATTGACCTTGATCTCATCATTCATCTATGGAATCCTGCCTCCTGTTTCACCATCAAATTAA 1470 0.4007 MSKLSVYACLLNLSLLVIFPYSKASQADKLDEFIMSRSSQNAPMTFSWEEKDEVKTYSSAYVAPQEGLRLADKIDTLPGQPYGVDFDHYSGYVTVDPKAGRELFYYFAESPYFPSSKPLILWLNGGPGCSSLGYGAFEELGPFRVNSDGKTLYRNKYAWNEVANVLFLESPAGVGFSYSDTTSDYDKSGDKRTANDAYVFLINWLERFPQYKTRDFYITGESYAGHYVPQLAYTILSNNKLYNKTIINLKGISIGNAWIDDATSLKGLYDYFWTHALNSDQTHELIDKYCDFTSEKISAICVNATEKALIEKGHIDFYNIYAPQCHDSSLKNGSTGSVYEFDPCSDNYGIAYLNRPEVQKALHAKPTNWTHCSDVILKWNDSPVTILPTIKYLIDSGIKLWIYSGDTDARVPVTSSRYSINTLKLPITAAWRPWYSGKEVGGYVEGYKGLTLVTVRGAGHLVPSWQPARALTLISSFIYGILPPVSPSN 489
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01808 489 ProSitePatterns Serine carboxypeptidases, histidine active site. 450 467 IPR033124 GO:0004185
Car05g01808 489 ProSitePatterns Serine carboxypeptidases, serine active site. 218 225 IPR018202 GO:0004185
Car05g01808 489 Gene3D alpha/beta hydrolase 69 327 IPR029058 -
Car05g01808 489 Pfam Serine carboxypeptidase 78 479 IPR001563 GO:0004185|GO:0006508
Car05g01808 489 SUPERFAMILY alpha/beta-Hydrolases 73 482 IPR029058 -
Car05g01808 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 155 167 IPR001563 GO:0004185|GO:0006508
Car05g01808 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 168 178 IPR001563 GO:0004185|GO:0006508
Car05g01808 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 204 229 IPR001563 GO:0004185|GO:0006508
Car05g01808 489 PRINTS Carboxypeptidase C serine protease (S10) family signature 450 463 IPR001563 GO:0004185|GO:0006508
Car05g01808 489 Gene3D - 386 480 - -
Car05g01808 489 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 18 485 IPR001563 GO:0004185|GO:0006508
Car05g01808 489 PANTHER CARBOXYPEPTIDASE 18 485 - -
Car05g01808 489 Gene3D - 344 376 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01808 Car-Chr5 63262818 63266262 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01808 349 480 Calmodulin-binding Proteins AT2G22960 29.710 1.01e-11 62.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01808 K16297 - gmx:100779407 818.92