Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01793 ATGGATGTTCACGTGATAAATGTTGAAGACGAGAGTGATCATCAAGCTAGGGCAGATGATGGGGATACAGAACCTAGTGATGGTGAAATTAATAATGCTGAAAGCTTTGGATTTTATGTTGAGGATGGGATttctgagccatatttgggtatggaatttgattcagaagatgttgccaagactttctacgatgagtacgcgaaacacatgggtttcagcTCTAAAGTTGGTTCACGTACTCGCTCTAAAGCTGATGGGCCAAATATGTATGTGGAGTTTGTGTGTGGAAGGGAAGGTTTAAAAAAAAGGTTTAATGACAGTTGTGATGCAATGATTAGGATTGAGCTAAAGGATCAAAATAAATGGGTTGTAACCAAATTGGTGAAGGAACATAGTCATTCAATGGTGAATTCCAGCAAGACACAAAACCTGCATCCACGTAAGCATTTTTCCAGTGTTGGAAGGACTATGCCTGAAACTTATCAAGGAGTTGGACTTGTTCCAAGTGGTGTCCTGTATGTATCTATGGATGGGAATCACATTTCTAATCAGAATACTTGTGGGATGCTGAATATTCATGCTGCCAATGTCGCGGAACCAAGTCAGCCTGTTAAAAATGCCACATTGATGAATTATACTACTAGGGCGCCTTTCCAAAACAGAACATTAGGGAAGgatgctcataatctgctggagtattttaagaaaatgcaggctgagaatcctggtttcttctatgctatacaactcgatgaagacaatcatatgtctaatgtcttttgggcagatgcccgatccaggacagcttacagtcattttggtgatgcagttcatctagacaccacatacagagttaaccagtacaaagtgccatttgctccttttactggagtgaaccatcatggtcagacggttttgtttggttgtgcacttcttttggacgattccgaggcttctttattgtggctcttcaagacatttctcacagcaatgaatgcccgacaacctgtctctataactactgatcaagacagagctatacaggcagcagcttcacaagttttcccacaagctcgtcactgtattaacatgtggcatgtcttgagagaaggccaggaaaagttggcccatgtatgtctagcgcatccaaattttcagggtgaactttataattctatcaacctgacagaaaccattgaggagtttgagtcatcttggaattctatccttgataaatatgaactcagaagaaatgactggcttcagtcattgtataatgctcgtgctcaatgggttccagcatatttccgtgattcattttttgctgcaatatctcctaatcaaggatttggtggttcttttttttatggttatgtcaacccattgatgacattgccgttgttctttaggcagtatgaaagagctgtagagagctggattgaaaaggaaatagaagcagactttgagacaatttgcacaacaccagatttgaagacaccttcaccaatggagaaacaggctgctaacctctatacaaaaaaaatatttctgaagtttcaggaagagctagtcgaaacttttgtttatactgcaaatataattgaaggagatgaggtaaatagcacattcaaggttgcgaaatttgaggatgtccacaaggcatacattgttgcatttaaccatgctgaattgagagctagctgtagttgccaaatgtttgagtattcaggcattctttgcaggcatatcttaactgttttcactatgacaaatgtacttacattaccatctcattacatcttaaaacggtggacaagaaatgcaaagagtagtgccggattggatgaacgtactgctgaattacatggaaaggagtctctgacatcgaggtacagcaatctatgcagggaagccatcagatatgctgaggaaggggcagtaactgttgaaacttttaatgctgcaatgactggtcttaaagatggtggaaagaaggttgcTGCAATGAAAAGAAGTGTTGCCAAAGCTACACCTAATAATCAGGCCAGTGGGACTACTTATAATGACAAAAAAACTACCAATTCAACTTTGGATACAACTCCTCTTTTGTGGCCTCGACAAGATGAAGTAACAAGGAGGTTTAATCTTAATGATTCTGGTGGTCCAGTTCAATCAGTTGCTGACCTAAATTTTCCACGAATGGCCCCGGTGTCTCTTCATCGAGATGATGTTCCATCTGGAAATATGGTGGTTCTTCCATGCCTAAAATCAATGACATGGGTAATGGAGAACAAAAACTCAAGTCCACAGAATAAAGTAGCTGTAATCAATCTGAAGTTGCAAGATTATAGTCGGACTCCATCAAAAGAATCTGAGGTTAAGTTTCAGCTCTCAAGAGTTTCTTTGGAACCAATGCTGAAGTCTATGGCCTACATCAGTGAACAGCTCTCAAGACCAGCAAATAAGGTTGCTGTAATAAATCTCAAGCTTCAAGATGCGGATACAACGTCCGGTGAGTCTGAAGTAAAGTTTCAGGTGTCCAGGGATACATTGGGTGCCATGCTACGATCAATGGCCTATATCCGTGAGCAACTATCTCATGCTGGCGAGGCGCAATCAGAACCTCTGTTGAAAAAGCATAGGAAGTAA 2649 0.191 MDVHVINVEDESDHQARADDGDTEPSDGEINNAESFGFYVEDGISEPYLGMEFDSEDVAKTFYDEYAKHMGFSSKVGSRTRSKADGPNMYVEFVCGREGLKKRFNDSCDAMIRIELKDQNKWVVTKLVKEHSHSMVNSSKTQNLHPRKHFSSVGRTMPETYQGVGLVPSGVLYVSMDGNHISNQNTCGMLNIHAANVAEPSQPVKNATLMNYTTRAPFQNRTLGKDAHNLLEYFKKMQAENPGFFYAIQLDEDNHMSNVFWADARSRTAYSHFGDAVHLDTTYRVNQYKVPFAPFTGVNHHGQTVLFGCALLLDDSEASLLWLFKTFLTAMNARQPVSITTDQDRAIQAAASQVFPQARHCINMWHVLREGQEKLAHVCLAHPNFQGELYNSINLTETIEEFESSWNSILDKYELRRNDWLQSLYNARAQWVPAYFRDSFFAAISPNQGFGGSFFYGYVNPLMTLPLFFRQYERAVESWIEKEIEADFETICTTPDLKTPSPMEKQAANLYTKKIFLKFQEELVETFVYTANIIEGDEVNSTFKVAKFEDVHKAYIVAFNHAELRASCSCQMFEYSGILCRHILTVFTMTNVLTLPSHYILKRWTRNAKSSAGLDERTAELHGKESLTSRYSNLCREAIRYAEEGAVTVETFNAAMTGLKDGGKKVAAMKRSVAKATPNNQASGTTYNDKKTTNSTLDTTPLLWPRQDEVTRRFNLNDSGGPVQSVADLNFPRMAPVSLHRDDVPSGNMVVLPCLKSMTWVMENKNSSPQNKVAVINLKLQDYSRTPSKESEVKFQLSRVSLEPMLKSMAYISEQLSRPANKVAVINLKLQDADTTSGESEVKFQVSRDTLGAMLRSMAYIREQLSHAGEAQSEPLLKKHRK 882
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01793 882 MobiDBLite consensus disorder prediction 1 24 - -
Car05g01793 882 MobiDBLite consensus disorder prediction 673 700 - -
Car05g01793 882 Pfam FAR1 DNA-binding domain 61 136 IPR004330 -
Car05g01793 882 PANTHER PROTEIN FAR1-RELATED SEQUENCE 3 34 808 - -
Car05g01793 882 SMART 26again6 566 593 IPR006564 GO:0008270
Car05g01793 882 Pfam MULE transposase domain 277 368 IPR018289 -
Car05g01793 882 MobiDBLite consensus disorder prediction 1 31 - -
Car05g01793 882 Pfam SWIM zinc finger 564 590 IPR007527 GO:0008270
Car05g01793 882 PANTHER PROTEIN FAR1-RELATED SEQUENCE 10-RELATED 34 808 IPR031052 GO:0006355
Car05g01793 882 MobiDBLite consensus disorder prediction 674 700 - -
Car05g01793 882 ProSiteProfiles Zinc finger SWIM-type profile. 555 591 IPR007527 GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01793 Car-Chr5 63050568 63057800 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF FAR1 Car05g01793 MULE 9.2e-25 CL0219
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01793 - - gmx:100786516 1452.57
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01793 05 63050568 63057800 Car02g01852 02 48818864 48823927 PCT