Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01784 ATGGAACATAAACTATCAACAACAAGTGATCAAGGAGAGGGACAACCTATAAGATGTAAAGCTGCGGTTGCAAGAAAAGCAGGTGAAGCATTGGTTATAGAAGAAATCATGGTGGCCCCACCAATGCCTCGTGAGGTTCGGATTCGTATTCTATGTACATCTCTCTGCCACAGTGATATCACTCTCTGGAAGATGCAGGAACCTCCTGGTTGTTTTCCAAGAATTCTAGGTCATGAGGCAGTTGGGGTTGTGGAAAGTGTAGGGAAGGATGTAACTGAAGTTACAAAAGGAGATGTGGTTATTCCAATTTTCCTACCTGATTGTGGGGAGTGTTTAGATTGCAAATCAACCAAGAGCAATCTTTGTACTGATTTCCCATTCAAAATTTCTCCTTGGATGCCAAGACACGAGAGCACTAGATTCACTGACCTAAATGGAGAGATCATATACCATTTCATGTTTGTTTCAAGTTTCAGTGAGTACACTGTGGTTGACATTGCCAATGTAACAAAGATTGATCCAGAAATCCCTCCTGACAGGGCATGTCTTCTCAGTTGTGGTGTATCAACAGGTAGGGTAGGTGCTGCTTGGAGAACAGCAGGGGTGGAGCCAGGGTCTACAGTGGCTATTTTTGGGCTGGGATCTGTTGGATTAGCAGTTGCAGAGGGAGCTAGACTGTGTGGAGCAACTAGGATTATTGGTGTGGATGTTATCCCTGAAAAATTTGAAATTGGAAAGAAATTTGGACTCACAGACTTTATCCATGCTCTGGAATGTGGGAACAAACCTGTGAGCCAGCAGGTGATCATAGAGATGACCAACGGGGGAGCAGATTATTGCTTTGAGTGTGTTGGTACGGCATCATTGGTGCATGAAGCATATGCTTCTTGTAGAAAGGGTTGGGGAAAAACAATTGTTGTAGGAGTGGATAAGCCAGGAGCTAAGTTGAGCCTAAGTTCTAGTGAAGTCCTTCATGATGGGAAGAGCCTCACGGGATCCTTATACGGAGGACTCAAACCCAAATCTCATGTTCCCATTCTGCTTAAACGTTACATGGACAAGGAACTGCAGTTGGATAAATTTGTGACTCATGAGGTGGAGTTTAAGGACATCAATAAAGCTTTTGATTTATTGAACAATGGACAATGTCTTCGATGTGTGATTTGGATGGACAAATGA 1179 0.4334 MEHKLSTTSDQGEGQPIRCKAAVARKAGEALVIEEIMVAPPMPREVRIRILCTSLCHSDITLWKMQEPPGCFPRILGHEAVGVVESVGKDVTEVTKGDVVIPIFLPDCGECLDCKSTKSNLCTDFPFKISPWMPRHESTRFTDLNGEIIYHFMFVSSFSEYTVVDIANVTKIDPEIPPDRACLLSCGVSTGRVGAAWRTAGVEPGSTVAIFGLGSVGLAVAEGARLCGATRIIGVDVIPEKFEIGKKFGLTDFIHALECGNKPVSQQVIIEMTNGGADYCFECVGTASLVHEAYASCRKGWGKTIVVGVDKPGAKLSLSSSEVLHDGKSLTGSLYGGLKPKSHVPILLKRYMDKELQLDKFVTHEVEFKDINKAFDLLNNGQCLRCVIWMDK 392
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01784 392 Gene3D - 22 385 - -
Car05g01784 392 SUPERFAMILY GroES-like 341 389 IPR011032 -
Car05g01784 392 Gene3D - 191 333 - -
Car05g01784 392 PANTHER ALCOHOL DEHYDROGENASE-LIKE 7 12 389 - -
Car05g01784 392 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 77 91 IPR002328 GO:0008270|GO:0016491
Car05g01784 392 PANTHER ALCOHOL DEHYDROGENASE 12 389 - -
Car05g01784 392 SUPERFAMILY GroES-like 13 194 IPR011032 -
Car05g01784 392 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 176 353 IPR036291 -
Car05g01784 392 Pfam Zinc-binding dehydrogenase 216 337 IPR013149 -
Car05g01784 392 Pfam Alcohol dehydrogenase GroES-like domain 44 171 IPR013154 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01784 Car-Chr5 62991501 62995217 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01784 44 339 Monolignol Biosynthesis Gene Families AT4G37990 25.753 1.08e-10 60.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01784 K00121 - gmx:100817521 673.315