Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01775 ATGATTTATGGTAGGTGTGCAGCTTGCAAGAGTCAAAGAAGAAGGTGTCCTCCTGATTGCATTTTCTCTCCTTATTTCCCTGCCAATGATCCTCAAAGATTTGAGTATGTTCACAGAATCTATGGTGGAAGCAATGTTGGAAAAATGCTTCAGCAACTCCCTTGTTATGTACGAGAACAAGCTGCTAATACTTTGTATGTAGAAGCACAATGTAGGATTCAAGATCCTGTTTATGGATGTGTTGGAATTATCTCTAAATTGTATCAACAAATCCATGATACAGAAGTTGAGCTGGCCAAAATTCAAACTCAAATTGCTTCTCATAAGATCAAAAATTCACAAGTGGAATCAAATTTTAATATTTTGTCAACAATTGATGCTGAATCAAATTTGAACTTCTTGCCACCTCAGAGTAACAACATGGAATTTCAATTGTCTAGTCAAATTTTTAATTGGTTCAGTTAA 465 0.3505 MIYGRCAACKSQRRRCPPDCIFSPYFPANDPQRFEYVHRIYGGSNVGKMLQQLPCYVREQAANTLYVEAQCRIQDPVYGCVGIISKLYQQIHDTEVELAKIQTQIASHKIKNSQVESNFNILSTIDAESNLNFLPPQSNNMEFQLSSQIFNWFS 154
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01775 154 Pfam Lateral organ boundaries (LOB) domain 5 102 IPR004883 -
Car05g01775 154 Coils Coil 84 104 - -
Car05g01775 154 PANTHER LOB DOMAIN-CONTAINING PROTEIN 4-RELATED 1 117 - -
Car05g01775 154 PANTHER LOB DOMAIN-CONTAINING PROTEIN 23-RELATED 1 117 - -
Car05g01775 154 ProSiteProfiles LOB domain profile. 4 105 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01775 Car-Chr5 62845331 62846275 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01775 5 118 AS2 family AT3G26660 61.404 5.87e-47 147
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Car05g01775 LOB 2.1e-36 No_clan