Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01774 ATGGATTCTTTTGAAGCAGATGGAAATGGAAATGGGAATGGGGAGGAGTCTTTGCCCCCTCCGCCTCCTGTTGTCCCCTCGGATATGGTACCTCTCAAAGCAGAGGAGGTGCTCCCAGCTCCTCCTGAACCTGTTAAGAAAAAATTTTCCCGCCTTCCAATAGCCAGAACTGGTCTGGGATCAAAAGGAATGAAGATACCTCTTCTAACTAATCACTTCAAAGTTAATGTCAATAATAATGATGGATATTTTTTCCATTACAGTGTGGCTTTTACTTATGAAGATGGACGCCCTGTGGAAGGTAAGGGTGTTGGGAGGAAGATAATGGACAGGGTGCAGGAGACATATCATTCTGACTTGAATGATAAGGACTTTGCATATGACGGAGAGAAAAGCCTGTTTACTATTGGCTCTCTACCTCAAAAGAAGCTTGAGTTTGAAATTGTTTTAGAGGATGTTACGTCTAACAGAAAtaatggcagtcgtagtcctgatggtaatggtaatgAGGACAATGAGAGTGACAAAAAGAGGATGCGACGCCCATATCGTGCTAAAACATTTAGAGTGGAGATTAGCTTTGCTGCGAAAATTCCCATGTCTGCCATTGTCAATGCATTGCGTGGACAGGAATCAGATAATTTCCAAGAAGCCGTTCGAGTTCTGGATATCATATTGAGGCAACATGCTGCTAAGCAGGGCTGCCTACTTGTTCGCCAGTCTTTCTTCCACAATGATCCAAAGAATTTTGCTGATGTGGGGGGTGGCGTTCTAGGTTGCAGAGGATTCCATTCAAGTTTTAGAGCTACACAGAGCGGCCTCTCTCTTAACATAGATGTGTCAACTACCATGATAATTCAACCTGGGCCTGTGGTGGATTTCTTAATTTCCAACCAAAATGTGAGAGATCCCTTTCAACTTGACTGGGCAAAGGCCAAAAGGACACTTAAAAACCTGAGGGTTAAAACTCATCCATCCAATCAAGAGTGGAAAATTTGTGGACTCAGCGAAGTCCCATGCAAAGAGCTGACTTTTACTTTGAAGAAAAGAGATGGAGATGATGGTACTGAAGAAATGTCTGTTTTGGATTATTTTGTTAATGTCCGGAAGATAGATTTGCGCTACTCTGCTGATCTTCCTTGTATTAATGTTGGCAGGCCTAAACGGCCAACATATTTCCCCATTGAGCTGTGCGAATTGGTATCGTTGCAACGATATACAAAATCTCTGTCCACACTTCAAAGGGCTTCATTAGTGGAGAAGTCCAGACAGAAGCCACAGGAGAGGATGAAAATATTGACTGATGCACTTAAAAGCAGCAACTATGCTTCTGAACCTCTGCTTCAAAATTGTGGAATTTCTATAAGCACAGGCTTTACTCAAGTGGAAGGTCGTGTTTTGCCTGCTCCTAAGTTGAAGTTTGGCAATGGTGAAGATTTCAATCCGAGAAATGGAAGATGGAATTTTAACAACAAGAAATTTGTGCAGCCAACAAAGATAGAAAGATGGGCTGTTGCAAACTTTTCTGCACGCTGTGATGTACGAGGACTTGTGAGGGATATAATTAGAATTGGAAATATGAAAGGAATTAATATTGACCAACCATTTGATGTGTTCGAAGAAAGTCCTCAGTTTAGACGTGCCCCACCTATGGTTAGGGTCGAGAAGATGTTCGAGAACATTCAATCTAAACTTCCTGGGGCTCCTCAATTCCTTCTCTGTTTGCTCCCTGATCGAAAAAACTGTGATATTTATGGTCCGTGGAAAAAGAAGAACCTTGCCGATTACGGAATTGTTAATCAGTGCATGTGTCCTTTAAGAGTCAATGATCAGTATTTGGGCAATATTATGTTGAAGATCAATGCCAAGCTTGGTGGGTTGAACTCATTGTTGGGAGTTGAAATTTCTCCTTCTCTTCCTATTGTTTCCAAAGCACCCACCCTCATTCTAGGAATGGACGTGTCACATGGCTCTCCAGGGCAGACTGATATTCCTTCAATTGCCGCAGTCGTCAGCTCTAGACAGTGGCCTCTAATATCAAAATATAGGGCATGTGTTCGCACACAGTCTGCAAAAGTTGAAATGATAGATAATTTGTTCAAGAAAGTTTCAGAAAATGAGGATGAAGGCATCATGAGGGAACTTTTGCTCGATTTTTATAATAGTTCTGGGAAGAGAAAACCAGATAATATAATAATATTCAGGGACGGAGTTAGTGAGTCACAATTCAATCAAGTCTTGAATATCGAACTTGACCAGATCATTGAGGCATGCAAATTCTTGGATGAAAAATGGACCCCAAAATTTGCTGTAATTGTTGCTCAAAAGAACCATCACACAAGATTCTTCCAGCCCAATTCTCCTGACAACGTCCCACCTGGAACTATTATTGACAATAAAATTTGCCATCCAAGAAACTATGATTTTTACCTCTGTGCACATGCTGGAATGATAGGCACCAGTAGGCCTACTCACTACCATGTGCTGCTTGATGAGATTGGCTTCTCCCCCGATGAACTTCAGGAACTTGTTCATTCTCTGTCATATGTGTACCAGAGGAGCACCACTGCTATTTCAGTTGTTGCACCCATATGCTATGCACACTTAGCTGCAACTCAATTGGGGCAGTTCATGAAATTTGAAGACAAATCTGAGACATCCTCAAGCCATGGTGGGCTGAGTGCTGCAGGAGCTGTACCTGTCCCTCAGCTGCCAAAGTTGCAGGAAAACGTGTGCAACTCTATGTTCTTCTGTTGA 2757 0.4168 MDSFEADGNGNGNGEESLPPPPPVVPSDMVPLKAEEVLPAPPEPVKKKFSRLPIARTGLGSKGMKIPLLTNHFKVNVNNNDGYFFHYSVAFTYEDGRPVEGKGVGRKIMDRVQETYHSDLNDKDFAYDGEKSLFTIGSLPQKKLEFEIVLEDVTSNRNNGSRSPDGNGNEDNESDKKRMRRPYRAKTFRVEISFAAKIPMSAIVNALRGQESDNFQEAVRVLDIILRQHAAKQGCLLVRQSFFHNDPKNFADVGGGVLGCRGFHSSFRATQSGLSLNIDVSTTMIIQPGPVVDFLISNQNVRDPFQLDWAKAKRTLKNLRVKTHPSNQEWKICGLSEVPCKELTFTLKKRDGDDGTEEMSVLDYFVNVRKIDLRYSADLPCINVGRPKRPTYFPIELCELVSLQRYTKSLSTLQRASLVEKSRQKPQERMKILTDALKSSNYASEPLLQNCGISISTGFTQVEGRVLPAPKLKFGNGEDFNPRNGRWNFNNKKFVQPTKIERWAVANFSARCDVRGLVRDIIRIGNMKGINIDQPFDVFEESPQFRRAPPMVRVEKMFENIQSKLPGAPQFLLCLLPDRKNCDIYGPWKKKNLADYGIVNQCMCPLRVNDQYLGNIMLKINAKLGGLNSLLGVEISPSLPIVSKAPTLILGMDVSHGSPGQTDIPSIAAVVSSRQWPLISKYRACVRTQSAKVEMIDNLFKKVSENEDEGIMRELLLDFYNSSGKRKPDNIIIFRDGVSESQFNQVLNIELDQIIEACKFLDEKWTPKFAVIVAQKNHHTRFFQPNSPDNVPPGTIIDNKICHPRNYDFYLCAHAGMIGTSRPTHYHVLLDEIGFSPDELQELVHSLSYVYQRSTTAISVVAPICYAHLAATQLGQFMKFEDKSETSSSHGGLSAAGAVPVPQLPKLQENVCNSMFFC 918
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01774 918 MobiDBLite consensus disorder prediction 155 180 - -
Car05g01774 918 Pfam Argonaute linker 1 domain 238 286 IPR014811 -
Car05g01774 918 Gene3D paz domain 282 406 - -
Car05g01774 918 SUPERFAMILY Ribonuclease H-like 555 877 IPR012337 -
Car05g01774 918 SMART Piwi_a_2 571 879 IPR003165 GO:0003676
Car05g01774 918 PANTHER TRANSLATION INITIATION FACTOR 2C, PUTATIVE-RELATED 2 917 - -
Car05g01774 918 SUPERFAMILY PAZ domain 283 442 IPR036085 GO:0005515
Car05g01774 918 MobiDBLite consensus disorder prediction 1 38 - -
Car05g01774 918 Gene3D - 638 918 IPR036397 GO:0003676
Car05g01774 918 SMART DUF1785_2 236 288 IPR014811 -
Car05g01774 918 Pfam Piwi domain 572 879 IPR003165 GO:0003676
Car05g01774 918 Gene3D - 466 632 - -
Car05g01774 918 Pfam Mid domain of argonaute 481 534 IPR032473 -
Car05g01774 918 ProSiteProfiles Piwi domain profile. 571 879 IPR003165 GO:0003676
Car05g01774 918 Pfam N-terminal domain of argonaute 65 226 IPR032474 -
Car05g01774 918 CDD Piwi_ago-like 446 873 IPR045246 -
Car05g01774 918 Pfam PAZ domain 292 418 IPR003100 GO:0005515
Car05g01774 918 ProSiteProfiles PAZ domain profile. 313 402 IPR003100 GO:0005515
Car05g01774 918 CDD PAZ_argonaute_like 288 401 - -
Car05g01774 918 Pfam Argonaute linker 2 domain 428 474 IPR032472 -
Car05g01774 918 PANTHER EUKARYOTIC TRANSLATION INITIATION FACTOR 2C 2 917 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01774 Car-Chr5 62832068 62840038 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01774 56 918 Eukaryotic Initiation Factors Gene Family AT5G43810 36.192 8.44e-172 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01774 K11593 - gmx:100820376 1618.98