Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01770 ATGGCTACTGCCGGCGATGTTCTCAGGCAGACTTTACCGGAAGTCAGTCGTGCAGGTGAATTGCACGTGCTTGCCGTCGATGATAGTCACGTGGATCGTAAAGTCATTGAAAGATTGCTCAAATTCACTTCTTGCAAAGTGACGGTTGTTGAGAGTGGAACTAGAGCTTTACAGTATCTTGGGTTAGATGGGGATACAAGTTCCATTGGTTTTGATGGTGTGAAGgttaatatgattatgacagattattccatgcctgggatgacaggatatgaactactcaaAAAGATAAAGGTGTGTGTGTGTGAAATCTTCTTAGAGATTCCAGTGGTGGTTATGTCATCTGAGAATATCTTGACCAGAATTGATAGTTGCTTGGAGGAAGGAGCTGAGGAGTTTCTATTGAAACCTGTCAAGTTGTCAGATGTGAAACGCCTAACAGATTTCATCATGAGTGGTGAAGGGAAGAAAGTGGGAGGTAAAAGATCTCAAAAAAGAAGTCGATCAGATGATTGCATTTCATCTCTATCAAGTTCATGTTCAACGGTTTCTCATCAATGTGATCTATCTTCGTTGTCCCCGTCTGCAATGTCATCAAAGAAATCTAGACTATGA 615 0.3805 MATAGDVLRQTLPEVSRAGELHVLAVDDSHVDRKVIERLLKFTSCKVTVVESGTRALQYLGLDGDTSSIGFDGVKVNMIMTDYSMPGMTGYELLKKIKVCVCEIFLEIPVVVMSSENILTRIDSCLEEGAEEFLLKPVKLSDVKRLTDFIMSGEGKKVGGKRSQKRSRSDDCISSLSSSCSTVSHQCDLSSLSPSAMSSKKSRL 204
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01770 204 CDD REC_typeA_ARR 23 146 - -
Car05g01770 204 SMART REC_2 21 147 IPR001789 GO:0000160
Car05g01770 204 Gene3D - 21 182 - -
Car05g01770 204 Pfam Response regulator receiver domain 23 144 IPR001789 GO:0000160
Car05g01770 204 MobiDBLite consensus disorder prediction 155 204 - -
Car05g01770 204 PANTHER TWO-COMPONENT RESPONSE REGULATOR 16 204 IPR045279 GO:0009736
Car05g01770 204 PANTHER TWO-COMPONENT RESPONSE REGULATOR ARR3-LIKE PROTEIN 16 204 - -
Car05g01770 204 ProSiteProfiles Response regulatory domain profile. 22 151 IPR001789 GO:0000160
Car05g01770 204 SUPERFAMILY CheY-like 20 149 IPR011006 -
Car05g01770 204 MobiDBLite consensus disorder prediction 170 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01770 Car-Chr5 62814746 62817006 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01770 21 176 Response Regulator Gene Family AT3G48100 66.879 1.68e-69 208
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Car05g01770 Response_reg 2.4e-17 CL0304
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01770 K14492 - gmx:100306152 265.774
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01770 05 62814746 62817006 Car05g01770 05 62814746 62817006 ECH