Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01765 ATGGCGATCGCAGTAACAAGTAGACAATTATTCATAGATGGAGAATGGAGAGTTCCTCACCTCAACAAAAGGATTCCAATCATCAATCCTTCAACTCAAAACATCATAGGGGATATACCAGCTGCCACTAAGGAAGATGTTGATCTTGCTGTGGATGCTGCTAAAAGAGCTATCTCTAGAAACAAGGGTAGAGATTGGTCTAATGCTTCTGGTTCTGTTCGTGCTGGTTATCTAAGAGCCATAGCTGCAAAGATAACGGAGAAAAAGAATGAACTAGGCAAGCTTGAATCAATTGATTGTGGAAAACCACTGGATGAAGCACTAGCCGACCTGGATGATGTTATTGGTTGTTTTGAGTACTATGCTGGGCTTGCTGAAGGGTTGGATGCAAAGCAAAAGGCTCCTGTATCTCTTCCTTTGGAGACCTTCAAGAGCTATGTTCTCAAGGAGCCTATTGGTGTTGTTGCCTTAATTACTCCATGGAACTATCCTCTCTTAATGGCAACCTGGAAAGTTGCTCCAGCTCTGGCTGCTGGTTGTGCTGCAATATTGAAGCCGTCTGAATTGGCATCTCTGACCTGTTTGGAGCTAGGCGAAATATGCAGAGAAGTTGGTCTTCCTCCTGGTGTCTTAAATATTGTCACTGGATTAGGCCATGAAGCTGGTGCTTCTTTGGCATCCCATCCTGATGTAGATAAGATTGCCTTTACTGGTAGCTCTGCAACTGGGAGTAGGATTATGACAGCAGCAGCAGAGCTAATCAAGCCTGTTTCACTAGAGCTTGGTGGAAAGAGTCCAATCATTGTTTTTGAGGATGTTGACCTTGATAAGGTTGCTGAATGGACCATCCTTGGTTGCTTCTTTACAAATGGTCAGATATGTAGTGCAACATCTCGCCTGATTGTGCATGAAAGTATAGCATCAGAATTTGTGAATAGACTTGTGAAATGGGCCGAAAACATCAAAATTTCGGATCCCTTGGAAGAAGGATGCAGGCTAGGACCTGTTATCAGTGAAGCACAGTATAAGAAAGTATTGAATTTTATCTCAACGGCTAAAAATGAGGGTGCAACAATTTTGACTGGTGGGCGTCGCCCAGAGCATTTAAAGAGGGGGTACTTTGTTGAACCAACCATCATAACAGATGTGACTACCTCAATGCAAATTTGGAGAGAAGAAGTTTTTGGACCTGTACTCGCTGTAAAAACATTTAGCACTGAGGAAGAAGCTATTGATCTAGCAAATGACACCCACTATGGCTTGGGGTCTGCCGTAATGTCAAATGATTTAGAAAGATGTGAGCGCCTATCTAAGGCTCTTCAAGCTGGAATTGTATGGATCAATTGTGCTCAACCAAGCTTCATCCAAGCCCCATGGGGAGGCATTAAACGTAGCGGCTTTGGTCGCGAATTAGGAGAATGGGGACTTGATAACTACTTGAGTGTGAAGCAAGTTACTAGATGCACTGGGGTAGTTCATTTTGTTAGTGTGTGTTTGGAAAGTAAACTTTCCACATTGCAACTATAA 1527 0.4309 MAIAVTSRQLFIDGEWRVPHLNKRIPIINPSTQNIIGDIPAATKEDVDLAVDAAKRAISRNKGRDWSNASGSVRAGYLRAIAAKITEKKNELGKLESIDCGKPLDEALADLDDVIGCFEYYAGLAEGLDAKQKAPVSLPLETFKSYVLKEPIGVVALITPWNYPLLMATWKVAPALAAGCAAILKPSELASLTCLELGEICREVGLPPGVLNIVTGLGHEAGASLASHPDVDKIAFTGSSATGSRIMTAAAELIKPVSLELGGKSPIIVFEDVDLDKVAEWTILGCFFTNGQICSATSRLIVHESIASEFVNRLVKWAENIKISDPLEEGCRLGPVISEAQYKKVLNFISTAKNEGATILTGGRRPEHLKRGYFVEPTIITDVTTSMQIWREEVFGPVLAVKTFSTEEEAIDLANDTHYGLGSAVMSNDLERCERLSKALQAGIVWINCAQPSFIQAPWGGIKRSGFGRELGEWGLDNYLSVKQVTRCTGVVHFVSVCLESKLSTLQL 508
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01765 508 Pfam Aldehyde dehydrogenase family 23 485 IPR015590 GO:0016491
Car05g01765 508 PANTHER NAD-DEPENDENT ALDEHYDE DEHYDROGENASE FAMILY PROTEIN 1 488 - -
Car05g01765 508 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 24 483 IPR016162 GO:0016491
Car05g01765 508 PANTHER BETAINE ALDEHYDE DEHYDROGENASE 1 488 - -
Car05g01765 508 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 259 266 IPR029510 GO:0016491
Car05g01765 508 CDD ALDH_F10_BADH 27 487 - -
Car05g01765 508 ProSitePatterns Aldehyde dehydrogenases cysteine active site. 287 298 IPR016160 GO:0016491
Car05g01765 508 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 267 458 IPR016163 GO:0016620
Car05g01765 508 SUPERFAMILY ALDH-like 5 487 IPR016161 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01765 Car-Chr5 62773010 62780668 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01765 1 489 Aldehyde Dehydrogenase Gene Family AT1G74920 77.096 0.0 811
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01765 K00130 - gmx:100170755 874.004
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01765 05 62773010 62780668 Car05g01765 05 62773010 62780668 ECH
Car07g01009 07 8946723 8951434 Car05g01765 05 62773010 62780668 PCT