Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01754 ATGAGTCTAAACTTTCTTTTTATGTTTTTGCTAATCATGGTAATTATGACTAACTCAGAAGAAGATAATGTGAGAAAAGCCCTTGTCACATTCATGGATAAACTTGAGCCACCTAGGAATTATATTATCAATAACCATACAGATTTCAAATGGGGTTGGAACCTTACAACAGACCCCTGCATCCATAACTGGCACGGTGTAACTTGCTACACAAGCAACCGATATGTTAAGAGTATAGTTCTTGATGAACTTAATTTCACTGGTGTTCTAGATGCAACTTCTCTTTGCATTGCTAACAATCTTCAAATTCTCAGCCTCAGAAACAACAATTTACATGGTTTTATATCAGAGGACATAAGAAACTGCAAATTCTTGACACACTTGATTCTTAGTGGAAACAAATTCTCTGGTAATCTTCCTATTTCGATTCCTCAACTGCATAACATGAAGCGGTTTCATGTTTCAGGGAATCACTTCATTGGAGAGCTTCCGAATATGGTTAATGTTACAAGCTTGATATCATTTCTTGCTCAAAACAACAACTTCATTGGTCAGATTCCTGATTTTGATTTCTCCAACTTTGAAGCTTTCAATGTCTCTAACAACAACTTACGGGGTCCTGTTCCAGATACTAGAGGTAGATTTCATGCAGATAGTTTTTATGGTAATCCTAATTTATGTGGAAAACCAATTTCTAATTCATCATGTccaccacctccaccaccaccTCATCCAGTTGATAAGAAAGACGAAAAATCATTTCTTGATAATTTGCCAATTTATTCAGGTTACATAGTACTTGTTTTAATTTTTCTATTTTTCTTGATATTCAAGTTGATAAGAAAATTCATGACAAAAGATAAAGAAAAAGCGTTAGATCATGGTGAAAAGAAGGACATGGAACTAGACATGAGCTGTGCTGGTGTCGGCGGCGGCGGCGGTGAGAAGCTTAGTGAGATATTAAATTCCAATGGATCAAAGAGTTGGCTGAATGGTCTTGGGATGAAATCAGAGTATTCTTTGACATCTGTGGAAAGTGGAGTAACTACATCAGGTCTTGTTCTTCTTTCAACTAGAAGGCTTAGGGGGTTACAATTTGAGGACTTGAGAGGAAAACATGGAAGTCTTTACAAGGTTATGCTAGATAATGGTGTTTTGTTGGCTGTTAAGAGGATCAAGGATTGGGGAATTTCAAAGCATGATTTTGAGAGAAGGATGAACTTGATAGCTCAAGTGAAGCATCCACTTGTAATGCCACCTGTTGCTTATTATTGCTCTCAGCAAGAGAAGCTACTTGCTTATGAATATTTGACAAATGGTAGCCTCTTCACGTTGCTCTATGGATCTCAAAGTGGACATTGTCTTGATTGGAGGAGCAGACTAGATGTTGCAGTAAAGATAGCCGATGCTTTGGCCTATATGCATGAGGAGCTTGGTGAGAGTGGAATAGCACATGGTAACTTAAAATCAAGCAACATTCTATTTGACAAGAATATGGATCCACAAATAAGCGAGTATGGCCTAATGGTGGCTGAAAATCAAGGTGTCATTTCTCATATGAAAGGCCTCAAAAACAGAAGCATGTCTGCAGCCATCTTCAGAGCTGATATATATGCTTTTGGTGTCATACTTCTCGAACTCCTGACAGGGAAAGTAGTTAAAAATGATGGATTCGATTTGGTTAAATGGGTGAATTCAGTGATCTCAGAAGAATGGACTGCAGAAGTTTTTGACAGGTCCTTAATCTCACAAGGTGCTTCTGAAGAGAGGATGGTGAACTTGTTGCAGGTGGCATTAAAATGCATAAATCCTTCTCCAAATGATAGGCTAAGTATGAGTCAAGTGGCACTGATCACAAATGCATTAAGAGACGAAGACGAAAAATCTGTATCTTTTGACTCATGA 1905 0.3727 MSLNFLFMFLLIMVIMTNSEEDNVRKALVTFMDKLEPPRNYIINNHTDFKWGWNLTTDPCIHNWHGVTCYTSNRYVKSIVLDELNFTGVLDATSLCIANNLQILSLRNNNLHGFISEDIRNCKFLTHLILSGNKFSGNLPISIPQLHNMKRFHVSGNHFIGELPNMVNVTSLISFLAQNNNFIGQIPDFDFSNFEAFNVSNNNLRGPVPDTRGRFHADSFYGNPNLCGKPISNSSCPPPPPPPHPVDKKDEKSFLDNLPIYSGYIVLVLIFLFFLIFKLIRKFMTKDKEKALDHGEKKDMELDMSCAGVGGGGGEKLSEILNSNGSKSWLNGLGMKSEYSLTSVESGVTTSGLVLLSTRRLRGLQFEDLRGKHGSLYKVMLDNGVLLAVKRIKDWGISKHDFERRMNLIAQVKHPLVMPPVAYYCSQQEKLLAYEYLTNGSLFTLLYGSQSGHCLDWRSRLDVAVKIADALAYMHEELGESGIAHGNLKSSNILFDKNMDPQISEYGLMVAENQGVISHMKGLKNRSMSAAIFRADIYAFGVILLELLTGKVVKNDGFDLVKWVNSVISEEWTAEVFDRSLISQGASEERMVNLLQVALKCINPSPNDRLSMSQVALITNALRDEDEKSVSFDS 634
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01754 634 Gene3D Ribonuclease Inhibitor 193 238 IPR032675 -
Car05g01754 634 ProSiteProfiles Protein kinase domain profile. 362 622 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01754 634 Pfam Leucine rich repeat N-terminal domain 27 69 IPR013210 -
Car05g01754 634 Gene3D Phosphorylase Kinase; domain 1 368 436 - -
Car05g01754 634 Gene3D Ribonuclease Inhibitor 21 192 IPR032675 -
Car05g01754 634 Gene3D Transferase(Phosphotransferase) domain 1 437 633 - -
Car05g01754 634 PANTHER OS05G0588300 PROTEIN 5 633 - -
Car05g01754 634 Pfam Protein kinase domain 370 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01754 634 SUPERFAMILY Protein kinase-like (PK-like) 370 616 IPR011009 -
Car05g01754 634 PANTHER LRR RECEPTOR-LIKE KINASE 5 633 - -
Car05g01754 634 SUPERFAMILY L domain-like 53 226 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01754 Car-Chr5 62648092 62651400 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01754 53 623 Receptor kinase-like Gene Family AT1G68400 32.109 7.25e-82 270
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Car05g01754 Pkinase 3.8e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01754 - - pvu:PHAVU_009G180700g 828.165