Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01752 ATGAGGGTAAGATCATCATCATACATTAATTTGGTGGACTTGGTGTCAGGGGATATTTTCAATTTCCGTCAACCTCCTCAGCGAGCTATGAGTGTTCCTGCAATTGTGTCTGATGTAGATGATAAACAAAGCAGCAATGATGACGATTCAAATGGTTTCTCTTCAGAACAATGTCGCAAGATGATAGTAGTAGCAAATTTTCTTCCTCTGAATGCTAAAAAGGATGACATTTCTGGCAGATGGTGTTTTAGTTATGATGAAGATTCGATTTTTTGGCAGTTAAAGGATGGTCTCTCTTCTGATATCGATGTTGTTTACGTGGGATCTCTTGAGGTTGATGTTGATGAAAGCGAGCAAGAGGAAGTTTCCCTTCAGTTGCTGGAGGAATTCAACTGTGTGCCTACTTTTATTCCTTCAGAAATACAGAAACAGTTTTACGACGGATTCTGCAAGAATTATTTGTGGCCTCTATTCCATTACATGCTGCCTGGGCATCCAGGTTATTGCAATCGCTTTGATAGGTCACTTTGGCAGGCTTATGTTTCTGCTAACAAAATATTTGCTGATAAAGTCACGGAGGTCCTTAATCCGACAAATGATTATGTGTGGGTTCATGACTATCATCTTATGGTTCTTCCGTCATTTCTGCGGAGGCGGTTTACTCGTGTCAGGCTAGGCTTTTTCCTCCACAGTCCGTTTCCTTCATCCGAAATTTATCGAACTCTGCCAGTCAGAACTGAAATTTTGAAAGCACTGCTTAATGTAGATTTGATTGGTTTTCACACATTTGATTATGCTCGTCATTTTCTGTCTGTCTGCAGTCGAATGCTTGGCTTGGAATATGAATCCAGAAGGGGTTACATTGGACTCGAATACTTTGGCCGTACAATATTCGTTAAAATATTGCCTGCTGGGGTTCATATGGGTCGCATTCAATCTGCTTTAGATCACCCTTCTGCCTCTATCAAAGCTAGAGAAGTCTGCAAGCAATTTAAGGGGAAAAAACTTATAATTGGTGTTGATGATATTGACATCCACAAAGGCGTGAGCTTGAAGTTCTTCGCGGTCGAGCAACTATTGAAGGAAGATCCGTTACTGCAGGGTCAGTTAATATTGGTCCAAATTTTAAATCCTCCAAGGAGCGATGGGAAAGATGTTGAGGAAGCAAAGAAGGAGGTGTATGCAATTGCCGAAAAGATAAATGAAAGGTTTGGTTTCCCGAGTTATAAACCTGTGGTCATCATTGATCATTACATTCCTTTCCATGAGAAGGCAGCTTATTATGCTTTGGCTGATTGTTGCATTGTGAATGCGGTGCGGGACGGTATGAATTTGATTCCATACAAGTACATTGTGTGCAGACAGGGGAGTTCTAAAATGGACGAAGAGTTGGATATCAATTCCGACTCCCCTCGGACAAGTGCAGTCGTTGTTTCTGAGTTTGTAGGTTGCTCGCCGTCTCTTAGTGGGGCAATCAGGGTGAATCCATGGGACATAAATGCTGTTGCTGAAGCTTTGAAGTTGGCTATCACAATGTCCAACAAAGAGAAACAACATCGGCACGAGAAGAACTATCAATATGTTAGTTCTCATGATGTGGCTTATTGGGCCCAACGTTTTGAGCAAGACCTAGTGTTCTCGTGTAAGGATCATTATACGAAACTTTGCTGGGGTGTTGGCTTCGGCTTGGATTTCAGAGTTTTGTCCCTCTTTCCTGGGTTCAAGAAGCTGTCCAAAGACCATGTTGTTTCGGCATATAAAAGGACAAACTGCAGAGCGATCTTTTTGGATTATGACGGTACAATTGTACCTCAGGGTTTCATCAATGGAGCCCCCCGTCCTGAAGTCGTATCTGTGCTAAACAATCTCTGCAGTGACCCTAACAACACTGTGTTTATTGTCAGTGGCCGAGGGAAAACTTCATTGGACAAATGGTTTGATCAATGTGAGAATCTTGGTCTAGCAGCCGAGCACGGTTATTTTATAAGGTGGGATGAAAAATCAAGTTGGAAAATGAGTCATGTTAGCACAgattttgcatggaaaggtattgctgaacctgtgatgagatcatatactgaggcaacagatggctcctacatagagaccaaagagagtgcattggtgtggcattataatgatgctgattctgattttggatcttggcaagccaaagagcttttggaccatcttgaaaatgttcttgcaaatgagcctgtagttgttaaaaaggggatgtatattgttgaagtcaagcttcaggggataactaaagggctagttgtagagcaagttttgtctacactaacaaagaacggtaaatcgccggatttcgttctgtgcattggtgatgatagatctgatgaggacatgtttgagagcatattaaacaaaagttatggtggtgaaactgaaacctcatcttcagcagcagaaatatttgcatgtactgttggacaaaaaccaagcaaagctagatactacttggatgatagtgtgaaagtgatgatgttacttcaaggtcttggtgctgctgctgctgaggctgctgcaaaagtttctgctgaaacctcttctgaagtttgttctgaagatgttgttTGA 2604 0.3283 MRVRSSSYINLVDLVSGDIFNFRQPPQRAMSVPAIVSDVDDKQSSNDDDSNGFSSEQCRKMIVVANFLPLNAKKDDISGRWCFSYDEDSIFWQLKDGLSSDIDVVYVGSLEVDVDESEQEEVSLQLLEEFNCVPTFIPSEIQKQFYDGFCKNYLWPLFHYMLPGHPGYCNRFDRSLWQAYVSANKIFADKVTEVLNPTNDYVWVHDYHLMVLPSFLRRRFTRVRLGFFLHSPFPSSEIYRTLPVRTEILKALLNVDLIGFHTFDYARHFLSVCSRMLGLEYESRRGYIGLEYFGRTIFVKILPAGVHMGRIQSALDHPSASIKAREVCKQFKGKKLIIGVDDIDIHKGVSLKFFAVEQLLKEDPLLQGQLILVQILNPPRSDGKDVEEAKKEVYAIAEKINERFGFPSYKPVVIIDHYIPFHEKAAYYALADCCIVNAVRDGMNLIPYKYIVCRQGSSKMDEELDINSDSPRTSAVVVSEFVGCSPSLSGAIRVNPWDINAVAEALKLAITMSNKEKQHRHEKNYQYVSSHDVAYWAQRFEQDLVFSCKDHYTKLCWGVGFGLDFRVLSLFPGFKKLSKDHVVSAYKRTNCRAIFLDYDGTIVPQGFINGAPRPEVVSVLNNLCSDPNNTVFIVSGRGKTSLDKWFDQCENLGLAAEHGYFIRWDEKSSWKMSHVSTDFAWKGIAEPVMRSYTEATDGSYIETKESALVWHYNDADSDFGSWQAKELLDHLENVLANEPVVVKKGMYIVEVKLQGITKGLVVEQVLSTLTKNGKSPDFVLCIGDDRSDEDMFESILNKSYGGETETSSSAAEIFACTVGQKPSKARYYLDDSVKVMMLLQGLGAAAAEAAAKVSAETSSEVCSEDVV 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01752 867 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 593 793 IPR006379 -
Car05g01752 867 CDD HAD_TPP 593 837 - -
Car05g01752 867 Pfam Trehalose-phosphatase 595 832 IPR003337 GO:0003824|GO:0005992
Car05g01752 867 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 60 544 - -
Car05g01752 867 Gene3D Glycogen Phosphorylase B; 52 312 - -
Car05g01752 867 Gene3D - 674 754 - -
Car05g01752 867 CDD GT20_TPS 60 544 IPR001830 GO:0003824|GO:0005992
Car05g01752 867 SUPERFAMILY HAD-like 592 842 IPR036412 -
Car05g01752 867 Gene3D - 594 828 IPR023214 -
Car05g01752 867 Gene3D Glycogen Phosphorylase B; 313 529 - -
Car05g01752 867 PANTHER ALPHA,ALPHA-TREHALOSE-PHOSPHATE SYNTHASE (UDP-FORMING)-RELATED 5 851 - -
Car05g01752 867 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 5 851 IPR001830 GO:0003824|GO:0005992
Car05g01752 867 Pfam Glycosyltransferase family 20 60 544 IPR001830 GO:0003824|GO:0005992
Car05g01752 867 TIGRFAM T6PP: trehalose-phosphatase 592 840 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01752 Car-Chr5 62635149 62640978 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01752 5 859 Trehalose Biosynthesis Gene Families AT1G23870 62.821 0.0 1149
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01752 K16055 - gmx:100812031 1306.2
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01752 05 62635149 62640978 Car05g01752 05 62635149 62640978 ECH