Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01734 ATGGGTTTATCTTCCCTTCACGCCTGCATGGAATCATCTGCAGAACATTGGTTGCAGGGCACAATTCACGAGGAATCTGCAGGAATGGATTCATCATCACCAATATCTGGTGACATGCTAACATGTTCAAGACCAATGATGGATCAAAGGAGGCTAAGACCACCACATGACCAATCACTAAAATGTCCAAGGTGTGATTCAACTCACACCAAATTCTGTTACTACAACAATTACAGTCTCTCTCAGCCTAGGTATTTCTGCAAGACATGTAGAAGGTATTGGACAAAAGGAGGTACCCTTAGAAACATCCCTGTAGGTGGTGGTTGTAGAAAGAACAAGAAAGTTTCTTCCAAAAAATCCAATGATCATAACCACCATTTAGCtaataacaataataatattcataatCAACCTCAACAACAACAAATGCCTAATTCATATATTCATCACAACCCTAAAGATCTTCAACTTTCTTTCCCTGATGTTCAATTCTCTCACCTAAGTAACTTACTTGGGACTAATGGAGCATTAGGAAACCCTAATTTCATGGAGAACAAGTATGGTAATAATGTTGGCATGCTTGAGATTAACCACCCTAGGCCTATTGATTTCATGGAAAGTAAGTTAGAAGGAATAATTGGGAGTAGTAGTTCTAGGAATTTTGATTTTTTTGGAAATAGTCATGACCATATGAGTATGAGTATGAATATGAATATGGGTGTTGGGGTTGGGGTTGGAGGAGATAATAATATGATGAATGGTCAAAATGGGTTGCCACATGATTTTCATCATGCATTTGGTGGCATGTCATTTGATCATGGAAACAATAACAATATTGGGGCTTATAATTTGATGGATTCTTGTCAAAGACTCATGCTTCCATATGATGCCAATGATGAGGATGATCATAATAACGAGTCAATTGATGTGAAGCCAAACCCTAAACTGTTGTCCCTTGAATGGAACCAAGACCAAGGTTGCTCTGATGCTGGAAAAGAGTCGTATGGTTATGGATCATGGACTGGCATGATGAATGGTTATGGATCTTCCACAACAAACCCTTTGGTCTAA 1071 0.3828 MGLSSLHACMESSAEHWLQGTIHEESAGMDSSSPISGDMLTCSRPMMDQRRLRPPHDQSLKCPRCDSTHTKFCYYNNYSLSQPRYFCKTCRRYWTKGGTLRNIPVGGGCRKNKKVSSKKSNDHNHHLANNNNNIHNQPQQQQMPNSYIHHNPKDLQLSFPDVQFSHLSNLLGTNGALGNPNFMENKYGNNVGMLEINHPRPIDFMESKLEGIIGSSSSRNFDFFGNSHDHMSMSMNMNMGVGVGVGGDNNMMNGQNGLPHDFHHAFGGMSFDHGNNNNIGAYNLMDSCQRLMLPYDANDEDDHNNESIDVKPNPKLLSLEWNQDQGCSDAGKESYGYGSWTGMMNGYGSSTTNPLV 356
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01734 356 PANTHER DOF ZINC FINGER PROTEIN DOF5.6-LIKE 20 348 - -
Car05g01734 356 ProSiteProfiles Zinc finger Dof-type profile. 60 114 IPR003851 GO:0003677|GO:0006355
Car05g01734 356 PANTHER DOF ZINC FINGER PROTEIN DOF1.4-RELATED 20 348 IPR045174 GO:0003700|GO:0006355
Car05g01734 356 MobiDBLite consensus disorder prediction 126 147 - -
Car05g01734 356 MobiDBLite consensus disorder prediction 109 147 - -
Car05g01734 356 Pfam Dof domain, zinc finger 57 114 IPR003851 GO:0003677|GO:0006355
Car05g01734 356 ProSitePatterns Zinc finger Dof-type signature. 62 98 IPR003851 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01734 Car-Chr5 62330878 62332937 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01734 1 356 C2C2-Dof Transcription Factor Family AT5G62940 43.000 7.27e-63 203
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-Dof Car05g01734 zf-Dof 2.7e-33 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01734 - - gmx:100806697 441.425