Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01730 ATGTCTACCATTGATGAGGATTTTATTGTTCCTAAACAAGAGACTGGTGAAGCTCCCCACCCAATAACCATAGATTGGGAAATGGAAAAACAGCTGATCATGGAGACTGCAAATAATGCTATGGAAGAATTAACAAGGCTTCTTAAATTGAATGAGCCTTTCTGGTTTAGATCTATAGAAGATGAGAGATTCGTTTTTCAACGTGAGACCTATGACAAGATTTACCAGAAGAGCAATTATTTAAAGGGGCGTCGCAAGCGTACAGAGGCAACAAAAGATTCAGTTATAGTGAGCATGGGTGCTGCACAGTTGGTGGGCATGTTTCTAGATTCGGAAAAATGGATGAATCTTTTTCCAACAATTGTTAAAAATGCAGTAACAGTGGAAGTATATATGAAGAAGGTTCGATGGAAAGCAGAAATGGAGCTTTGCAGTTGGTATGTAATTTTGGTATCTTGGGTTGAACACATAGAAGTGGATGATAAGAGTAAAACTGACTTGCTATTCAAAAAAGCTATTTGTAGCAATAATGGATATAGAGCTGAAAGATGGCTTTTGACATTGGAAAGAATGTGCCAGAGATTTTCAACTCATTCAATTCAAACTATTCCTTCTCTAGGACTAGGAGGTTACTATACTCTTCCTTAA 648 0.3735 MSTIDEDFIVPKQETGEAPHPITIDWEMEKQLIMETANNAMEELTRLLKLNEPFWFRSIEDERFVFQRETYDKIYQKSNYLKGRRKRTEATKDSVIVSMGAAQLVGMFLDSEKWMNLFPTIVKNAVTVEVYMKKVRWKAEMELCSWYVILVSWVEHIEVDDKSKTDLLFKKAICSNNGYRAERWLLTLERMCQRFSTHSIQTIPSLGLGGYYTLP 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01730 215 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG10-RELATED 27 130 - -
Car05g01730 215 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN HDG10-RELATED 151 200 - -
Car05g01730 215 ProSiteProfiles START domain profile. 26 129 IPR002913 GO:0008289
Car05g01730 215 Pfam START domain 37 130 IPR002913 GO:0008289
Car05g01730 215 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 27 130 IPR042160 -
Car05g01730 215 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 151 200 IPR042160 -
Car05g01730 215 SUPERFAMILY Bet v1-like 27 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01730 Car-Chr5 62296548 62297527 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01730 19 204 Homeobox Transcription Factor Family AT3G03260 29.719 9.31e-30 113
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01730 K09338 - jre:108988074 156.377