Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01727 ATGCAGACCGCGGCTTTCACTCTCTCTCCTTCCCTTCCTCTCCGTAACATCAATAACCGTTTCACACGTTCCCTTAACCTCCGTCTCTCCGCCAAATCAAACGACGCCGTCAATCCCAATGccgcttcctcttcctcttcattcactcgtcaatcttggtccatttctccttcctcttcTTTCAAATTCAGACCTCTTCCTCTCCTTTCAACCTCCGATCCCTCTCCTCCTAGAGCCACTTCCGTTCCCGAATCCGCCGGCGAATCTGCCGACTCTAGTTCGTTGATTAAGACTCTTCAACTTGGATCGTTGTTTGGCTTATGGTACCTCTTCAATATCTACTTCAATATTTACAATAAACAGGTTTTGAAAGCGTGTCATTTCCCTGTAACAGTGACTGTCGTTCAATTTGCTGTTGGGACTGTTCTTGTAACGTTTATGTGGGCTTTTAATCTCTACAAGAGGCCCAAAATCAATCGCGCTATGCTTGCAGCGATATTGCCACTTGCTGTGGTGCATACTTTGGGGAACCTTTTCACCAATATGAGTCTTGGAAAGGTGGCTGTCTCATTCACTCACACCATTAAAGCTATGGAGCCTTTCTTTTCTGTCATCCTTTCTGCTATGTTCCTTGGAGAGATGCCTACACCTTGGGTGGTTGGTTCCCTCCTGCCTATTGTTGGTGGAGTTGCCCTGGCGTCTGTTACTGAGGCCTCTTTCAACTGGGCTGGATTTTGGAGTGCAATGGCTTCCAATGTGACAAACCAATCACGTAACGTTCTTAGCAAAAAGGTCATGGTTAAGCAAGAGGAATCCTTGGACAACATAACTCTCTTTTCTATAATAACAATAATGTCCTTCTTCATGTTAGCACCTGTGGCTATTTTCACGGAGGGTGTCAAATTTACCCCTGCTTACCTGCAATCTGCTGGCTTAAATGTTAGACAAGTGTACACCAGATCTCTTCTTGCTGCACTCTGTTTCCATGCATATCAGCAAGTTTCTTACATGATATTGCAGAGGGTATCACCTGTTACCCATTCCGTCGGCAATTGTGTGAAGCGGGTCGTAGTCATCGTTAGCTCTGTCATCATCTTCAAAACACCTGTGTCTCCTGTGAATGCTTTTGGCACTGCAATAGCACTTGCTGGTGTTTTTCTCTATTCGAGGGTGAAGCGAATTAAGTCAAAGCCAAAGACGGCTTAA 1206 0.4312 MQTAAFTLSPSLPLRNINNRFTRSLNLRLSAKSNDAVNPNAASSSSSFTRQSWSISPSSSFKFRPLPLLSTSDPSPPRATSVPESAGESADSSSLIKTLQLGSLFGLWYLFNIYFNIYNKQVLKACHFPVTVTVVQFAVGTVLVTFMWAFNLYKRPKINRAMLAAILPLAVVHTLGNLFTNMSLGKVAVSFTHTIKAMEPFFSVILSAMFLGEMPTPWVVGSLLPIVGGVALASVTEASFNWAGFWSAMASNVTNQSRNVLSKKVMVKQEESLDNITLFSIITIMSFFMLAPVAIFTEGVKFTPAYLQSAGLNVRQVYTRSLLAALCFHAYQQVSYMILQRVSPVTHSVGNCVKRVVVIVSSVIIFKTPVSPVNAFGTAIALAGVFLYSRVKRIKSKPKTA 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01727 401 PANTHER SOLUTE CARRIER FAMILY 35 17 374 - -
Car05g01727 401 Pfam Triose-phosphate Transporter family 99 389 IPR004853 -
Car05g01727 401 PANTHER TRIOSE PHOSPHATE/PHOSPHOENOLPYRUVATE TRANSLOCATOR-RELATED 17 374 - -
Car05g01727 401 SUPERFAMILY Multidrug resistance efflux transporter EmrE 313 392 - -
Car05g01727 401 SUPERFAMILY Multidrug resistance efflux transporter EmrE 145 235 - -
Car05g01727 401 TIGRFAM tpt: Tpt phosphate/phosphoenolpyruvate translocator 99 399 IPR004696 GO:0016021|GO:0022857|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01727 Car-Chr5 62267328 62271914 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01727 1 401 Antiporters AT5G33320 71.638 0.0 547
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01727 K15283 - gmx:732612 594.349
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01727 05 62267328 62271914 Car05g01727 05 62267328 62271914 ECH
Car07g01061 07 9411883 9414719 Car05g01727 05 62267328 62271914 PCT