Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01698 ATGGAATCTAAACCCTTAAAATCTATCAAGCTCCTCTGTAGCTACGGTGGCAAGATCCTTCCTCGCTCCACCGACGGCGAACTCCGTTACGTCGGCGGTCACACCAGAGTTCTCGCCGTCGATCGTTCAATTTCTTTTTCAGAACTGATGGTGAAACTCGGAGAGTTGTGCGGTTCGTCTGTGACTTTAAGGTGTCAATTACCAAAAGGAGATTTGGAAACGCTGATTTCCATCACCAACGATGAAGATTTGGCTAATATAATCGATGAATACGAACGTGCTTCATTGAAATTAACTCATCCGTTGAAGATCAGAGCCATTCTTTCGCTGCCGAAATCGCTTTTGAAAGTTTCTCCTGTTGCGTCGTCTTCGTCGTCCAGTACAAGTTGTTCTCCGTCCAGATCTCCTCATACCTCCGCTGAATCGCTGCCGTACACTATGGCTTATCGGATCAGACGCCAAATTCGTTCGCCGCGTGCGCCGGTAGGGTATCCGATCGGCGTCAGAAACGGCTCGGCGAAAGCTTGTTATATGGGCCAGTTTGACGGAAGCCCAAGGTCCTTTTATTGTGGGCCGCGTTGCAATTATTACTGCCATTAA 600 0.4833 MESKPLKSIKLLCSYGGKILPRSTDGELRYVGGHTRVLAVDRSISFSELMVKLGELCGSSVTLRCQLPKGDLETLISITNDEDLANIIDEYERASLKLTHPLKIRAILSLPKSLLKVSPVASSSSSSTSCSPSRSPHTSAESLPYTMAYRIRRQIRSPRAPVGYPIGVRNGSAKACYMGQFDGSPRSFYCGPRCNYYCH 199
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01698 199 MobiDBLite consensus disorder prediction 121 140 - -
Car05g01698 199 SUPERFAMILY CAD & PB1 domains 25 113 - -
Car05g01698 199 CDD PB1_UP2 12 108 - -
Car05g01698 199 PANTHER PB1 DOMAIN PROTEIN 1 199 - -
Car05g01698 199 SMART PB1_new 23 102 IPR000270 GO:0005515
Car05g01698 199 Pfam PB1 domain 26 98 IPR000270 GO:0005515
Car05g01698 199 PANTHER OS05G0427100 PROTEIN-RELATED 1 199 - -
Car05g01698 199 Gene3D - 29 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01698 Car-Chr5 61792312 61794474 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01698 9 119 MAP Kinase Kinase Kinase AT1G04700 44.144 9.71e-24 96.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01698 - - vra:106761207 254.603
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01698 05 61792312 61794474 Car05g01698 05 61792312 61794474 ECH
Car07g01093 07 9736587 9738096 Car05g01698 05 61792312 61794474 PCT