Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01694 atggaatctggagctagattctactcagttgatgacttcaattttgaccctaaatggcttattgatcctaagcatctttatgttgggccccggattggagaaggtgctcatgctaaagtctatgagggaaaatataaaaaccagattgttgctattaaaattgtacataaaggagaaactacagaagacattgtcaagagagaaggtcgctttgtgagggaggtggctatgttgtctagagtgcaacataagaacttggtgaagTTTATCGGTGCCTGCATGGAGCCAGTAATGGTGATAGTCACTGAGCTGTTATCAGGAGGAACGCTGCGCAAGTATTTGCTTAACATGCGCCCCAAATGCTTGGATACACATGTTGCCATTGGTTTTGCGCTTGATATTGGACGTGCTATGGAATGCCTGCATTCTCATGGGATCATACACCGTGATCTTAAACCTGATAACTTGCTACTGACTGAAGACCATGAAACAGTGAAGCTAGCAGATTTTGGTTTAGCAAGAGAAGAGTCTTTAACTGAGATGATGACAGCCGAAACGGGAACATACCGTTGGATGGCTCCAGAGttatatagtactgtcacattgaggcaaggggagaagaagcattataaCCATAAAGTCGATGCTTATAGCTTCGCAATCGTGTTTTGGGAGCTCTTGCACAACAAAGTTCCTTTTGAAGGCATGTCAAACCTTCAAGCAGCATATGCTGCAGCCTTTAAGAATGTTAGGCCGAGTGCGGACCATCTTCCTGAGGAATTGGCCGAAATTCTTACTTCATGCTGGCAAGAGGACGCAAATGCCCGACCCAACTTCACCCAGATAATCCAAATGCTCTTAAATTATCTCTACACAGTTTCACCTCCTCAACCTGCAATTCCTTCAAGAATATTCACTTCTGAGAACACTGTGTTGCCACCAGAGTCACCTGGTACAAGCTCCTTAATGGCAAAACGTGATGACACTGGCGATACACCGAGACTAAAAGAAGAAAACAAGCCTAATGGTTTCCTTTGCTGTTTCAGTCAGTGTTATTAA 1059 0.3163 MESGARFYSVDDFNFDPKWLIDPKHLYVGPRIGEGAHAKVYEGKYKNQIVAIKIVHKGETTEDIVKREGRFVREVAMLSRVQHKNLVKFIGACMEPVMVIVTELLSGGTLRKYLLNMRPKCLDTHVAIGFALDIGRAMECLHSHGIIHRDLKPDNLLLTEDHETVKLADFGLAREESLTEMMTAETGTYRWMAPELYSTVTLRQGEKKHYNHKVDAYSFAIVFWELLHNKVPFEGMSNLQAAYAAAFKNVRPSADHLPEELAEILTSCWQEDANARPNFTQIIQMLLNYLYTVSPPQPAIPSRIFTSENTVLPPESPGTSSLMAKRDDTGDTPRLKEENKPNGFLCCFSQCY 352
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01694 352 Gene3D Transferase(Phosphotransferase) domain 1 106 297 - -
Car05g01694 352 SMART serkin_6 26 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01694 352 ProSitePatterns Protein kinases ATP-binding region signature. 32 53 IPR017441 GO:0005524
Car05g01694 352 PANTHER SERINE/THREONINE-PROTEIN KINASE HT1-LIKE 1 327 - -
Car05g01694 352 CDD STKc_MAP3K-like 32 286 - -
Car05g01694 352 SUPERFAMILY Protein kinase-like (PK-like) 17 313 IPR011009 -
Car05g01694 352 Gene3D Phosphorylase Kinase; domain 1 14 105 - -
Car05g01694 352 ProSitePatterns Serine/Threonine protein kinases active-site signature. 146 158 IPR008271 GO:0004672|GO:0006468
Car05g01694 352 ProSiteProfiles Protein kinase domain profile. 26 290 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01694 352 Pfam Protein tyrosine and serine/threonine kinase 29 286 IPR001245 GO:0004672|GO:0006468
Car05g01694 352 PRINTS Tyrosine kinase catalytic domain signature 102 115 IPR001245 GO:0004672|GO:0006468
Car05g01694 352 PRINTS Tyrosine kinase catalytic domain signature 140 158 IPR001245 GO:0004672|GO:0006468
Car05g01694 352 PRINTS Tyrosine kinase catalytic domain signature 257 279 IPR001245 GO:0004672|GO:0006468
Car05g01694 352 MobiDBLite consensus disorder prediction 314 337 - -
Car05g01694 352 PANTHER SERINE-THREONINE PROTEIN KINASE 1 327 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01694 Car-Chr5 61760712 61763509 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01694 9 352 MAP Kinase Kinase Kinase AT5G50180 79.651 0.0 582
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Car05g01694 PK_Tyr_Ser-Thr 2.1e-57 CL0016
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01694 05 61760712 61763509 Car05g01694 05 61760712 61763509 ECH