Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01692 ATGAGCGCCCCTATGGAAACTGAGGAAAATCCCCCAACTGATCAAAACGGTGCCGTTTCCCAACACTCACCTCATCCTCCTTCTCTTTCTCCGGAGGACAAAGTTCTTGTCCCTGTCGAGGTTTGCTTAAAACCTTCCAGCACAGCTTCCATTAACGATGTCCGTTCAGCCGTTGAAGGGATGCTCGAAAAGAGGAGTTTGAGCTATAATGGTGGACCGATCCCCGTGCCCCTTGATATACCCTTTCTTGCTGATAATGTGCAAAGAATTTGCATTTGTGATACAGGTGAAGGGATGCAGAATGACGAGGTTCTTTTGTTCTGGCAGGTCAAGCCTGTTGTACATGTATTTCAGCTTAGCGAGGAAGGACCGTGTGAGGATATCAGCTCTGATGGCCAGTCTTCTAGCTTCAATGAATGGATTCTTCCTGCAAAAGAATTTGATGGCATGTGGGAAAGCCTAATATATGAATCTGGTCTAAAGCAAAGGTTGTTGCGGTATGCAGCGAGTGCTTTGCTCTTCACTGAAAAGGCTGTCGATCCATTCCTTGTTTCTTGGAACCGCATAATTCTTTTGCATGGTCCCCCAGGGACTGGAAAGACGTCTTTATGTAAAGCATTAGCTCAGAAACTATCAATTCGATTCAGCGCAAGATACCCACAGTCTCAGCTTGTTGAAGTGAATGCACATTCTTTGTTCAGTAAATGGTTCTCCGAAAGCGGCAAGCTGGTAGCAAAACTATTCCAAAAGATTCAAGAAATGGTAGAAGAAGAAAGCAATCTGGTATTTGTTTTGATCGATGAAGTCGAAAGCCTAGCTGCTGCTAGAAAAGCTGCTTTGTCTGGTTCTGAACCTTCTGATTCTATTCGGGTTGTCAATGCATTATTAACTCAGATGGATAAGTTAAAATCATCTCCAAATGTGATCATTCTAACCACATCAAACATTACTGCTGCTATTGATATTGCTTTTGTTGATAGAGCTGATATCAAAGCATATGTTGGTCCTCCAACTCTTCAAGCTCGGTACGAAATATTAAGGTCTTGCTTGCAGGAACTCATGCGTACAGGGATATTAACTAGTTCTGAGGATTGTAAGAATATTGTGCTTCCAAATTATGCTAGTGCAAAACCGAGGTTGAACGCACCAGATTTTCATGAGGGTACTACATCCATGCAACTGTTCAAGCAATTAGTTGAAACTGCAGAAGCATGTGAGGGAATGAGTGGAAGGTCTCTCAGAAAGCTTCCATTTTTGGCACATGCTGCACTTGCAAATCCTTTTGAATGCAACCCCATCAAGTTCTTATGTACAATGATAGAAACAGCAAAAAGGGAGCGCTCTGAGCTTCCTGACTAA 1359 0.4297 MSAPMETEENPPTDQNGAVSQHSPHPPSLSPEDKVLVPVEVCLKPSSTASINDVRSAVEGMLEKRSLSYNGGPIPVPLDIPFLADNVQRICICDTGEGMQNDEVLLFWQVKPVVHVFQLSEEGPCEDISSDGQSSSFNEWILPAKEFDGMWESLIYESGLKQRLLRYAASALLFTEKAVDPFLVSWNRIILLHGPPGTGKTSLCKALAQKLSIRFSARYPQSQLVEVNAHSLFSKWFSESGKLVAKLFQKIQEMVEEESNLVFVLIDEVESLAAARKAALSGSEPSDSIRVVNALLTQMDKLKSSPNVIILTTSNITAAIDIAFVDRADIKAYVGPPTLQARYEILRSCLQELMRTGILTSSEDCKNIVLPNYASAKPRLNAPDFHEGTTSMQLFKQLVETAEACEGMSGRSLRKLPFLAHAALANPFECNPIKFLCTMIETAKRERSELPD 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01692 452 PANTHER PACHYTENE CHECKPOINT PROTEIN 2 30 449 IPR044539 -
Car05g01692 452 Gene3D - 129 353 IPR027417 -
Car05g01692 452 SMART AAA_5 186 338 IPR003593 -
Car05g01692 452 MobiDBLite consensus disorder prediction 1 32 - -
Car05g01692 452 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 150 418 IPR027417 -
Car05g01692 452 MobiDBLite consensus disorder prediction 1 27 - -
Car05g01692 452 ProSitePatterns AAA-protein family signature. 308 327 IPR003960 GO:0005524|GO:0016887
Car05g01692 452 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 190 208 IPR001270 GO:0005524
Car05g01692 452 PRINTS ATP-dependent Clp protease ATP-binding subunit signature 304 318 IPR001270 GO:0005524
Car05g01692 452 Pfam ATPase family associated with various cellular activities (AAA) 190 335 IPR003959 GO:0005524|GO:0016887
Car05g01692 452 CDD AAA 188 336 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01692 Car-Chr5 61736750 61750075 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01692 190 356 Calmodulin-binding Proteins AT3G56690 28.994 8.03e-13 68.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01692 K22399 - gmx:100795009 785.408
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01692 05 61736750 61750075 Car05g01692 05 61736750 61750075 ECH