Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01689 ATGCTGCCGGATTCCTCTGAACAAGAAGACGATTCTGAAATCGACTTCGTCGAAATTGATCCTACTGGTCGATACGGTCGGTACAGGGAAGTTTTAGGAAAGGGGGCTTTCAAAAAAGTATATCGTGCTTTTGATGAATTGGAAGGAATTGAAGTGGCTTGGAATCAGGTTAAGGTGTCTGATCTAGTGCGTAATTCTGTAGATTTGGACCGCCTTTATTCTGAAGTTCATTTGCTCAAGACTTTGAAGCATAAAAATATTATTAAATTTTACAATTCATGGGTTGACGCCAAGAATGAGAACATTAATTTCATTACTGAAATTTTCACCTCCGGAACATTGCGCCAATACCGGAAGAAACATAAGCATGTTGATTTGAGAGCTTTGAAGAAATGGTCTAGGCAGATTTTGGAGGGCCTTTCGTATCTTCATAGTCATAAACCACCAGTTATTCATCGAGACCTTAAGTGTGACAACCTTTTTGTCAATGGGAATCAGGGGGAGGTGAAAATCGGTGATTTAGGATTGGCAGCCATCCTTCAACAGGCCAGTTCAGCTCACAGTGTTATCGGTACCCCGGAATTCATGGCCCCAGAACTTTATGAAGAGGAGTACAATGAGCTTGTCGACATATATGCTTTTGGCATGTGCTTACTAGAGTTGGTAACTGTTGAGTACCCGTATATTGAATGTGCCAATGCTGCTCAAATATACAAGAAAGTGACATCTGGAATAAAACCAGCATCATTGGCAAAAGTGACAGATCCCGAAGTTAAAGCCTTCATAGAAAAGTGTATTTCTCGTGCATCAGATCGGTTGCCTGCAAAGGCTCTCTTGATGGATCCCTTCCTTCAGTCAGATTATGATGGTGATAGTGTAGGTCGATCATCGAGATCTGGAGCCCACCATTCAGGAAATAACTTTAATCATCAATCCATCGGAGAAAGTGCCAAGGAAAACTCTGTTGAGACTAGTTGGGAATTTACAGTGGAAGGCCAAAGGAGAGATGTTAATACAATATTTTTAAAACTGCGAATTGCAGATTCCTCAGGCCATATTCGAAATATTCACTTCCCTTTCAATATTGGAGCAGACACTTCAATCTCCGTTGCCAGTGAAATGGTTGAGGAGTTGGAGCTTACCGATCAAGATGTTTCGACCATTGCTAAGACAATTGACTCAGAAATTCAATACCACATTCCTAGTTGGAATCCCAGTGAAACTCCCGACAATAATTCTTTTGAATTTTCTGGCCAGACCCCTGAAACTAAGACTGAGGCTTCTCCTATTGGAAATGATTCTCCTAGCAGCCTTGCTTTGGAAATATTACCTTCTGGTCGTAAGTACTGGTCAGACTCACCAAAGGGTGTTGGTGGAAACTCTCCAGCTCCGCGCTGTGCTTCGAACTTGTCTTATGAAGTGGATGTGAATGCTGATGAAGGCATCTTGTTTGCAAATAGTGCGGAGAAGGAATGTGACAGGACTGCTGATTCCCCGTTTGATGAAAGAAGTATTATATCGGACTATTCTGAAGCAACTGGTGGAAAGTCCTCTCTAGAAGAAATATCTGTACGTTACGATTCTGAAATAGAGGATATCAATACAATAGCAACAAAGTTGGAGACTTTGTTGGTTATGCAAAGAGAGGAGTTAGATGAACTGAAGAGGAAGCACAAATTAGCTGTCTCAGATTTTTTGAGTGAGTTTTCTCCAGAAATTTGCCAACAGATCCTAAGTATATGCAACCCGGAAATGCCTGACAGTGAAATGTAG 1773 0.414 MLPDSSEQEDDSEIDFVEIDPTGRYGRYREVLGKGAFKKVYRAFDELEGIEVAWNQVKVSDLVRNSVDLDRLYSEVHLLKTLKHKNIIKFYNSWVDAKNENINFITEIFTSGTLRQYRKKHKHVDLRALKKWSRQILEGLSYLHSHKPPVIHRDLKCDNLFVNGNQGEVKIGDLGLAAILQQASSAHSVIGTPEFMAPELYEEEYNELVDIYAFGMCLLELVTVEYPYIECANAAQIYKKVTSGIKPASLAKVTDPEVKAFIEKCISRASDRLPAKALLMDPFLQSDYDGDSVGRSSRSGAHHSGNNFNHQSIGESAKENSVETSWEFTVEGQRRDVNTIFLKLRIADSSGHIRNIHFPFNIGADTSISVASEMVEELELTDQDVSTIAKTIDSEIQYHIPSWNPSETPDNNSFEFSGQTPETKTEASPIGNDSPSSLALEILPSGRKYWSDSPKGVGGNSPAPRCASNLSYEVDVNADEGILFANSAEKECDRTADSPFDERSIISDYSEATGGKSSLEEISVRYDSEIEDINTIATKLETLLVMQREELDELKRKHKLAVSDFLSEFSPEICQQILSICNPEMPDSEM 590
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01689 590 Gene3D Phosphorylase Kinase; domain 1 9 107 - -
Car05g01689 590 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 342 396 IPR024678 GO:0004674|GO:0005524
Car05g01689 590 Coils Coil 537 557 - -
Car05g01689 590 PANTHER SERINE/THREONINE-PROTEIN KINASE-RELATED 7 585 - -
Car05g01689 590 CDD STKc_WNK 24 284 - -
Car05g01689 590 SUPERFAMILY Protein kinase-like (PK-like) 28 285 IPR011009 -
Car05g01689 590 MobiDBLite consensus disorder prediction 402 437 - -
Car05g01689 590 Gene3D Transferase(Phosphotransferase) domain 1 109 291 - -
Car05g01689 590 Pfam Protein kinase domain 30 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01689 590 MobiDBLite consensus disorder prediction 290 316 - -
Car05g01689 590 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Car05g01689 590 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 7 585 - -
Car05g01689 590 SMART serkin_6 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01689 590 ProSiteProfiles Protein kinase domain profile. 26 284 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01689 590 Gene3D - 338 428 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01689 Car-Chr5 61701552 61705864 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01689 102 578 MAP Kinase Kinase Kinase AT3G48260 56.341 1.95e-172 494
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Car05g01689 Pkinase 1.3e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01689 K08867 - gmx:100272204 798.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01689 05 61701552 61705864 Car05g01689 05 61701552 61705864 ECH