Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01666 ATGGGTACTCTCTTTTCTCCCAATAACCCCTCCACCCAATTTCACGCCACTGATTTCTTCCCCCATGAACCCGACCTTTTTCTTCACACTCCCAGAGGAAAACGAATTCCAGTGCACGCAACCATTTTGGCTTCAGCGTCCCCCATTCTAGAAAACATGGTAACGTCCAACAGAATCGTTAAAATTAACGGCGTTCCATACGACGCCGTCACTGCCTTCTTGCGCTTTCTCTACACCTCCAGGTGCAGCGAGGAGGATATGGAAAATTACGGATTACACCTTCTCGTATTGTCGCACGTGTACTCCGTGATACGCCTAAAGCAGATGTGCGTCGTTGGATTGTCCCAACGCGCGACCACAGATAACGTGGTGGACGTGTTGCAATTAGCGAAACTCTGCGATGCACCGGATCTTTACCTCAAATGCGTAAAGCTAATAACTAATAATTTCAAAGCGGTGGAAGAAACAGAGGGTTGGAAATTCTTGCAGAACAATGACCCTTGGCTCGAATTCGACATTCTCCGCTTCATAAACGAACACAAATCGAGGAAGAAGAGAGCGAAGAGACAGAGGGAGGAACAGAAGCTTTATGTGCAACTGAGTGAAGCAATGGAATGTTTGGAACATATATGTACAGAAGGATGCACAAATGTAGCGCCATACGATGTGAAGAAACAGAGGAAGAGGCCGTGTTCAAAATTCTCCACGTGCGAAGGTTTGCAGGTTTTGATAAGACACTTTGCCACGTGTAAGAGGAATCTAAAGGGAGGGTGCTTGCGTTGTAAGCGGATGTGGCAACTCTTTAGACTTCACTCTTCCATTTGCCTTCACCAAGATTCTTGCAAGGTCCCTCTTTGCAGACAAATTCAATTAAAAATTATAGAGAAAGAGAACAAGGAATTAGGTGATGCAAGGTGGAAAGTACTAGTGAGCAAAGTGGCTTCGGCTAAAGCCATGTCTTCCTTGACGCTGCCAAAGAGGAAGCAAGATGAGGAAATTGGACCATACAAAACCAATTAA 1020 0.4549 MGTLFSPNNPSTQFHATDFFPHEPDLFLHTPRGKRIPVHATILASASPILENMVTSNRIVKINGVPYDAVTAFLRFLYTSRCSEEDMENYGLHLLVLSHVYSVIRLKQMCVVGLSQRATTDNVVDVLQLAKLCDAPDLYLKCVKLITNNFKAVEETEGWKFLQNNDPWLEFDILRFINEHKSRKKRAKRQREEQKLYVQLSEAMECLEHICTEGCTNVAPYDVKKQRKRPCSKFSTCEGLQVLIRHFATCKRNLKGGCLRCKRMWQLFRLHSSICLHQDSCKVPLCRQIQLKIIEKENKELGDARWKVLVSKVASAKAMSSLTLPKRKQDEEIGPYKTN 339
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01666 339 Pfam BTB/POZ domain 24 116 IPR000210 GO:0005515
Car05g01666 339 Gene3D TAZ domain 190 313 IPR035898 -
Car05g01666 339 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 3-RELATED 20 332 IPR044513 -
Car05g01666 339 CDD BACK 119 162 - -
Car05g01666 339 Gene3D Potassium Channel Kv1.1; Chain A 14 113 IPR011333 -
Car05g01666 339 SUPERFAMILY POZ domain 23 148 IPR011333 -
Car05g01666 339 Pfam TAZ zinc finger 201 286 IPR000197 -
Car05g01666 339 SUPERFAMILY TAZ domain 192 290 IPR035898 -
Car05g01666 339 PANTHER BTB/POZ AND TAZ DOMAIN-CONTAINING PROTEIN 2 20 332 - -
Car05g01666 339 ProSiteProfiles BTB domain profile. 24 86 IPR000210 GO:0005515
Car05g01666 339 SMART BTB_4 24 118 IPR000210 GO:0005515
Car05g01666 339 Coils Coil 177 197 - -
Car05g01666 339 SMART TAZ_2 194 287 IPR000197 -
Car05g01666 339 Gene3D - 118 189 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01666 Car-Chr5 61492818 61495767 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TAZ Car05g01666 BTB 8.9e-12 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01666 - - gmx:100813611 457.988