Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01655 ATGGGTCGTAATCCACAAGTATGTAGGTCTTGTATTCACAACTGTCGATTGTTTCACCGAACAACCACACCATCATCGCCTACCTCTTTCTACAGGTTCATACTTAGTCAAAACGATTTCTCAGTTTTGTACCTTCCTTCTAAGTTAAAGCATACTATGCCACTCTTGGTTAATAAGAAAATCAACTTGGAGGATTCAAGTGGTCAGCGTTGGGTTGTAACAGTGTCAAATGATGATGGTTCTTTTGCTTTTAAGGAAGGATGGGATGTTTTCTCATTGAATCATGGGCTTGATATTGGATATCTTGTGGTATTCAATTGCATTAACAAGTTGGACTTTGATGTCAAGATCTATGATAAGTCCATCTGTGAAAGGCTTGAGTTTTCTAAGAAAAAAAATAGGAAAAAGAGAAGTAGATGCAGAAGTGGCTCTCCTGACAGAGGTTGTATGGAGGATGATTTAGGAGGAGCACAAAATAGCACAGAAAATGATAATGATGATGGAAGGGGTAAAACTATGCGCACATTAGAACAAATTGTAGACACATGTTGCATAACATCCCGTATGTATCAAAATGATGTAGATTTTTTTAACATTGATCCTATGTTCGAAGAGGTGTTGGGTACAGGGGATGCCTCATATGCATCTAAACTTGAATTATTTGGAAGAAACAATTCTTTTGGTGCAACAGACAAAAGCGCATATGACATGACTTCTGCTTTGATACTTGAAGAAAATGAAGAAAACAAATCCATTATGTCCAATATGGAATTTCAAGAATACAATTTTTCTGAGAACTTAGGAAGTGATCAGGCGGCAGTATCCGGAGAGAGGTTCAATGGGATCACAAATCTCATAGATGCTCAAATTCACATCGGTGAAATAAAGGAAGTCCCTATGAACATGACTCCCAAAATGTGCAGTTCCAATGATCAATTACATGCTACAGAGTTGCCAGAGGGAGAGTTTAATCAAGATAATGAGAGACACTTTGAAACTGCATCCGCTGTCTCATGCGTGGTGCCCACTGATAATGACTGTCTTAGGTTTAACGAGATCTCCAATCTCTTAGATGATCAAATTCACTATGGTGAAGTGAAGGAAGTGCCTATGGACATGACTCCAAAATCGTGCAGCCTCAATGATCAATCGAATGTGACAGGGTTGCCAGAGACTTTTAAGAGAGAGTTTAATGAAGATATTGAGAGTGACTTTGAAACTGCTGCAACTGTCACCTGTGTGGTGCTCACTGATAACGGGTGTCTTAAATTGCCAAAAAGCTTGTCCTTACCTCACCCCAAAAGATTAAGAATGAAGAGGACGGTGGTGCTACTTAGGGATCCACTAAGGAGATTGTGGCCAGTCCTTTACGTTGAAGAAACCTGGTTGACAAGTGGATGGTTAGATTTTCAAAGAGCAAACAATATCAAACAAGCTGATGTGTGTGTTTTCCAGGTTGAGAACCGGTCCGAACGTATCATTACTGTAGATATAGACCACAAGTGA 1506 0.3951 MGRNPQVCRSCIHNCRLFHRTTTPSSPTSFYRFILSQNDFSVLYLPSKLKHTMPLLVNKKINLEDSSGQRWVVTVSNDDGSFAFKEGWDVFSLNHGLDIGYLVVFNCINKLDFDVKIYDKSICERLEFSKKKNRKKRSRCRSGSPDRGCMEDDLGGAQNSTENDNDDGRGKTMRTLEQIVDTCCITSRMYQNDVDFFNIDPMFEEVLGTGDASYASKLELFGRNNSFGATDKSAYDMTSALILEENEENKSIMSNMEFQEYNFSENLGSDQAAVSGERFNGITNLIDAQIHIGEIKEVPMNMTPKMCSSNDQLHATELPEGEFNQDNERHFETASAVSCVVPTDNDCLRFNEISNLLDDQIHYGEVKEVPMDMTPKSCSLNDQSNVTGLPETFKREFNEDIESDFETAATVTCVVLTDNGCLKLPKSLSLPHPKRLRMKRTVVLLRDPLRRLWPVLYVEETWLTSGWLDFQRANNIKQADVCVFQVENRSERIITVDIDHK 501
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01655 501 ProSiteProfiles B3 DNA-binding domain profile. 28 121 IPR003340 GO:0003677
Car05g01655 501 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 404 501 IPR044837 -
Car05g01655 501 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS11G0197600-RELATED 8 195 IPR044837 -
Car05g01655 501 Gene3D - 23 123 IPR015300 -
Car05g01655 501 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS02G0598200-LIKE 8 195 - -
Car05g01655 501 PANTHER B3 DOMAIN-CONTAINING PROTEIN OS02G0598200-LIKE 404 501 - -
Car05g01655 501 CDD B3_DNA 16 119 IPR003340 GO:0003677
Car05g01655 501 SMART B3_2 410 499 IPR003340 GO:0003677
Car05g01655 501 SMART B3_2 18 121 IPR003340 GO:0003677
Car05g01655 501 Gene3D - 383 501 IPR015300 -
Car05g01655 501 MobiDBLite consensus disorder prediction 137 172 - -
Car05g01655 501 SUPERFAMILY DNA-binding pseudobarrel domain 411 496 IPR015300 -
Car05g01655 501 Pfam B3 DNA binding domain 418 496 IPR003340 GO:0003677
Car05g01655 501 Pfam B3 DNA binding domain 43 120 IPR003340 GO:0003677
Car05g01655 501 ProSiteProfiles B3 DNA-binding domain profile. 407 501 IPR003340 GO:0003677
Car05g01655 501 CDD B3_DNA 420 496 IPR003340 GO:0003677
Car05g01655 501 SUPERFAMILY DNA-binding pseudobarrel domain 26 123 IPR015300 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF B3 Car05g01655 B3 6.3e-08 CL0405
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01655 - - cam:101495675 1015.76
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01655 05 61317979 61321607 Car05g01655 05 61317979 61321607 ECH