Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01638 ATGGCGAACACAGATATCGACCCAAAAACCGGTTTCTGTTCTAATTACAGAACCTTCTACAGCCTCCGTCCAAACGTCCCTCTCCCTCCACCCTCTGAACCTCTCTCGCTCATCGACTATGCACTCTCTCTCCTCCCCTCCACCGCCACAACAAACAACACTCCCGCCCTCATTGACTCCGCCACCGACCACCACCTCTCTTACTCCCTCTTCCTCCACCAAGTCAAATCCCTCGCGTACTACCTTCAATCCCGCACATCTCTCTCCAAAGGCCACGTGGCATTCATCCTTGCTCCTTCTTCCCTCCACGTCCCANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCCCTACACGTCCCCGTACTCTATTTCTCCCTTATCTCTCTCGGCGTAACAGTCGCACCTGCTAACCCACTCAGTTCCCCTTCCGAGATAAATCACCTCGTTCAACTCACTAAACCCTCCATCGCCTTCGCAACTTCCGCCACTGCAACCAACATCCCTAACCTTCCACTCGGCACAATCCTCGTCGATTCTCCTTCATTCCTTTCCATGCTCGATTGTAAAGGTGAGCCACGCCGAGTTGAAACGAGTCAATCGGACTCAGCGGCGATTCTCTTCTCTTCGGGAACTACCGGACGAATCAAAGGCGCGTTGCTGACTCATCGTAACCTAATCTCGTTGATTGCTGGATTTTGTCACCTGAAACACGTGATGGAGAGCGACGAAGATGAACCGCATCCTGTTTCGCTGTTTACGCTTCCTCTTTATCACGTATTTGGATTCTTCATGATGGTTAGGGCTTTGGCTATGGGAGAGACACTGGTGCTTATGCAGAGGTTCGATTTTGAAAGGATGTTGAAGGCAGTTGAGAGGTATAAGATCACTTACATGCCGGTGTCGCCGCCGTTAATTACGGCGTTGGTTAAGTCGGAGTTGGTGAAGAAATACGATTTTAGTTCGATCAGATTGTTGGGGTCCGGTGGCGCGCCGCTTGGTAAGGAAATTGTGGAGAGCTTCAAAGCCAAATTCCCCAATGTGGAAATTGTGCAGGGCTATGGTCTGACTGAAAGTGGAGGAGGGGCAGCAAGAATGATAGGGTTTGAAGAGGCTAAGCGCCATGGTTCTGTGGGTCGACTAGCTGAAAATATGGAGGCCAAGATAGTGGACCCTGTTACTGGAGAGGCATTATCTCCTGGCCAGAAAGGGGAGCTTTGGTTGCGAGGACCATCAATCATGAAAGGTTATGTAGGAGATGATAAGGCAACGGTTGAGACATTGGATTCAGAGGGATGGCTGAAGACCGGTGATCTTTGTTATTTTGACTCTGATGGTTTTCTATTCATTGTAGATAGACTGAAGGAATTGATCAAATATAAAGCTTATCAGGTTCCCCCAGCTGAATTAGAGCACGTACTTCATGCCAATCCTGAAATTGCTGATGCTGCAGTTGTTCCGTATCCTGATGAAGATGCAGGGCAGATTCCAATGGCTTTTGTGGTAAGAAAGCCAGGAAGCAACATCACTGCAGCTCAGGTCATGGATTATGTGGCAAAGCAGGTGACACCATACAAGAAGATACGACGGGTTTCTTTTATCAGCTCTATTCCAAAATCTCCAGCGGGCAAAATTTTAAGAAGAGAATTAGTTGATATTGCTCTAACTAGTGGTTCATCCAAATTGTGA 1791 0.4478 MANTDIDPKTGFCSNYRTFYSLRPNVPLPPPSEPLSLIDYALSLLPSTATTNNTPALIDSATDHHLSYSLFLHQVKSLAYYLQSRTSLSKGHVAFILAPSSLHVPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLHVPVLYFSLISLGVTVAPANPLSSPSEINHLVQLTKPSIAFATSATATNIPNLPLGTILVDSPSFLSMLDCKGEPRRVETSQSDSAAILFSSGTTGRIKGALLTHRNLISLIAGFCHLKHVMESDEDEPHPVSLFTLPLYHVFGFFMMVRALAMGETLVLMQRFDFERMLKAVERYKITYMPVSPPLITALVKSELVKKYDFSSIRLLGSGGAPLGKEIVESFKAKFPNVEIVQGYGLTESGGGAARMIGFEEAKRHGSVGRLAENMEAKIVDPVTGEALSPGQKGELWLRGPSIMKGYVGDDKATVETLDSEGWLKTGDLCYFDSDGFLFIVDRLKELIKYKAYQVPPAELEHVLHANPEIADAAVVPYPDEDAGQIPMAFVVRKPGSNITAAQVMDYVAKQVTPYKKIRRVSFISSIPKSPAGKILRRELVDIALTSGSSKL 596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01638 596 Pfam AMP-binding enzyme C-terminal domain 503 578 IPR025110 -
Car05g01638 596 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 21 106 - -
Car05g01638 596 PANTHER 4-COUMARATE--COA LIGASE-LIKE 9 151 585 - -
Car05g01638 596 Pfam AMP-binding enzyme 153 494 IPR000873 -
Car05g01638 596 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 21 106 - -
Car05g01638 596 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 151 585 - -
Car05g01638 596 Gene3D - 149 489 IPR042099 -
Car05g01638 596 ProSitePatterns Putative AMP-binding domain signature. 240 251 IPR020845 -
Car05g01638 596 CDD 4CL 54 584 - -
Car05g01638 596 SUPERFAMILY Acetyl-CoA synthetase-like 153 589 - -
Car05g01638 596 Gene3D - 490 590 IPR045851 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01638 Car-Chr5 61137136 61141676 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01638 6 596 Monolignol Biosynthesis Gene Families AT5G63380 56.364 0.0 652
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01638 K01904 - gmx:100777435 815.839
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01638 05 61137136 61141676 Car05g01638 05 61137136 61141676 ECH