Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01637 ATGGGGTTTCATGACTTGGTTGTGCTATTTTGTTATGCTTGGTATGTCTTTTATGTAAGTAGTTGTTGCAGTGCTCAGTTACAATCTTCTCAGACACAAGTTCTATTCCAGTTGCAAAAACACTTAGAATATCCAACACAATTGGAAATATGGAAAGATCATTGGAAAGAACTTTGTTTTATCTCTTCTACACAAGTCAACATCACATGCAAGGACAATTTTGTCACAGAGCTAACTATCTTTGGTGATAAAGAAAAAAAAGGTAGAGATTTTGATGGTTTTGCTATTCCATATCAAACACTATCACAAAGCTTCTCAATGGACTCATTGGTTGCCACTCTTGCAAGGTTAACTAGCTTGAGAGTTCTTAATCTTGTTTCTCTGGGAATTTGGGGACCACTACCTGATAGAATTCATAGACTATTTTCACTTGAACATTTGGATTTGAGTTCAAATTTTCTTTATGGATCAATCCCTCCAAAAATTTCTACTATGGTCAACCTTCAAACACTTAGATTAAGTGATAACTTCTTCAATGGTACTATTCCAAACTTGTTCAATTCATCAAATACTCTCACATTTCTCAGTTTGAAGAATAATAAGTTGAATGGTCCATTTCCATTTTCAATCCTTAGTATCAAAACATTGATTAACATTGACATGTCAAGCAATAAAATATCAGGTAGCCTGCAAGATTTTACTGGTTTGAGTATCTTGGAACAATTAGATTTAAGAGAAAATGAATTAGATTCTTCACTACCTTCAATGCCTAAAGGGTTGATAAGTCTTTTCCTCAACAAAAACTCTTTCTCAGGTCAAATTCCAAAACACTATGGTCAACTAAATAGTCTTCAGAAGCTTGATATTTCCTTCAATGCACTAACAGGCATTGCTTTTTCTGAACTTTTTTCTTTGCCTAACATAAGTTACTTGAATTTGGGATCAAACATGTTGAGTGGACCACTCCAAAATCATGTTAAATGTGGCCACAATCTTAGTTTTGTTGATATATCAAACAATAGGTTAGTAGGAGATTTGCCTTCTTCTCTAAGAAATGTGTCGGAAAATCAAGTTGTTGTTAAGAGTGATGGAAACTGTTTATCTGGGAGTAGTGTGCATCATCAGCATGCAGTATCTTATTGCACAGAGGCTAATGGAAAGAAGAAACCGTACCGAGTTGGAGTTTTCGTCGGTGTCATTGTTGGAATTCTTGTTGTCATTGTGGTTTTGGGTTTATGCATTGTTGTGACTTGTAAAAAGTATTACTCCAAGGGGATTTCTGAGCAGCACCTGTTGCATAAAGCAGTTCAAGATAGCTACTCAGCAGGGTTTTCTTCTGAGCTTATTGCAAATGCAAGATATGTTTCTGAAGCTGTCAAATTAGGCAGAGAAGATCTTCCATCGTGTCGATCGTATTCATTGGAAGAGCTACGGGACGCCACAAATAATTTTGACAGTTCTAGTTTTCTTGGTGAAAATATATATGGCAAGTTGTACCAAGGAAAATTAGAGAGCGGGATACCAGTTGTAATAAGGTGCATACCTTTGTCGAAAAAGTACTCGATTCGGAATTTCAAACTAAGGCTGGATTTGCTTGCAAAGCTTCGCCACCCGCATTTGGTATCCCTCTTGGGGCATTGCATTGATGGAATTTTAGTAGAGCGTATCGACTCAAAAGTCTTTCTCATTTATGAATGTGTGTCAAATGGGAGTTTCCAGACTTATCTCTCAGGAGATAGTTCTGGCAAGATTTTCAATTGGTCGGAGCGATTGTCGGTTCTAATCAGTGTTGCTAAGGCTGTTCACTTCTTACACACTGGAATGATACCTGGTTTCTTCAAAAATAGACTTAAGATCAACAATGTTTTGCTTAATGAAAATTGGATGGCAAAGTTGAGTGACTATGGATTGTCTATTATCTCAGAAGAAACTGATGAAAGTGGGGTAAAAGGAGAAAGCCCTAATTCATGGCAAATGAAAAGGTCAGAGGATGATATTTATAGCTTTGGATTCATATTACTTGAGGCACTTGTTGGACCTTCAATGTCTTCTAGAAGAGAAGCAACTGTGCTAAATGCAATGGCTTCTTTCAATAGTCAGGATGAGTGGAAACAAATAGTGGACCCAGTTGTGCAAGCTACTTGCTGTAAAGAATCTCTATCTGTTGTAATTGCTATAACTAACAAGTGTATTTCTACCGAGTCATGGAGTCGACCGTCGATCGAAGATGTCCTTTGGAACTTGCAGTATGCTTCTCAAGTCCAGACAACAGCTGAAGGAGAAAAGAGAATCTGA 2295 0.3712 MGFHDLVVLFCYAWYVFYVSSCCSAQLQSSQTQVLFQLQKHLEYPTQLEIWKDHWKELCFISSTQVNITCKDNFVTELTIFGDKEKKGRDFDGFAIPYQTLSQSFSMDSLVATLARLTSLRVLNLVSLGIWGPLPDRIHRLFSLEHLDLSSNFLYGSIPPKISTMVNLQTLRLSDNFFNGTIPNLFNSSNTLTFLSLKNNKLNGPFPFSILSIKTLINIDMSSNKISGSLQDFTGLSILEQLDLRENELDSSLPSMPKGLISLFLNKNSFSGQIPKHYGQLNSLQKLDISFNALTGIAFSELFSLPNISYLNLGSNMLSGPLQNHVKCGHNLSFVDISNNRLVGDLPSSLRNVSENQVVVKSDGNCLSGSSVHHQHAVSYCTEANGKKKPYRVGVFVGVIVGILVVIVVLGLCIVVTCKKYYSKGISEQHLLHKAVQDSYSAGFSSELIANARYVSEAVKLGREDLPSCRSYSLEELRDATNNFDSSSFLGENIYGKLYQGKLESGIPVVIRCIPLSKKYSIRNFKLRLDLLAKLRHPHLVSLLGHCIDGILVERIDSKVFLIYECVSNGSFQTYLSGDSSGKIFNWSERLSVLISVAKAVHFLHTGMIPGFFKNRLKINNVLLNENWMAKLSDYGLSIISEETDESGVKGESPNSWQMKRSEDDIYSFGFILLEALVGPSMSSRREATVLNAMASFNSQDEWKQIVDPVVQATCCKESLSVVIAITNKCISTESWSRPSIEDVLWNLQYASQVQTTAEGEKRI 764
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01637 764 ProSiteProfiles Protein kinase domain profile. 484 751 IPR000719 GO:0004672|GO:0005524|GO:0006468
Car05g01637 764 Pfam Protein tyrosine and serine/threonine kinase 489 745 IPR001245 GO:0004672|GO:0006468
Car05g01637 764 Gene3D Transferase(Phosphotransferase) domain 1 567 763 - -
Car05g01637 764 PANTHER BNAA09G06560D PROTEIN 4 762 - -
Car05g01637 764 Gene3D Phosphorylase Kinase; domain 1 449 565 - -
Car05g01637 764 SUPERFAMILY L domain-like 65 364 - -
Car05g01637 764 Gene3D Ribonuclease Inhibitor 28 259 IPR032675 -
Car05g01637 764 Gene3D Ribonuclease Inhibitor 260 389 IPR032675 -
Car05g01637 764 PANTHER OS07G0166700 PROTEIN 4 762 IPR045272 GO:0004714|GO:0006468
Car05g01637 764 SUPERFAMILY Protein kinase-like (PK-like) 467 749 IPR011009 -
Car05g01637 764 SMART LRR_typ_2 141 165 IPR003591 -
Car05g01637 764 SMART LRR_typ_2 281 305 IPR003591 -
Car05g01637 764 SMART LRR_typ_2 236 259 IPR003591 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01637 Car-Chr5 61123608 61128509 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01637 9 696 Miscellaneous Gene Families AT5G14210 49.928 0.0 642
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-VI-1 Car05g01637 PK_Tyr_Ser-Thr 2.1e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01637 - - gmx:100802978 1184.86
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01637 05 61123608 61128509 Car05g01637 05 61123608 61128509 ECH