Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01631 atggTTTCAACGAGACGCAACAGTGGATCTTTCTCCACCTCTTCCTCCGCCGCCAACAACAACAACAGCACCGCTAAAAGATCTTCTTCTTCTTCCGATGACAAACCTCCTTCTTCTCCTTCCCCTAAGCGTCAAAAGGCTGACAATGGTGCTTCTGCCTCGGATAAACCGATGTCTCCTGCCGAGAATTCCAAGGATTTGCGTACTCCTGAGCCTCCCGCCGATCCCGGAGAATGTCGCCACGCCGATGCTCAGATCGATGAACCGGTCGCTGCTGATGATAAAACCGATGCAACACCACCGATCGCTGACGGTTCTTCGCCGACTCTGGTAGCTGATAAACCTAGGGCTTCATTCTCTTCGTGGAGTATATATCAGAAGCAAAACCCAAACCTTGAGGCTTCAGCTCCATGGTGCCGTCTTCTCTCCCAGTCTGCACAGAATCCCAATGTTGGCATTTGCACTCCTAACTTCACTATTGGCTCTAGCAGAAATTGCAACTTTCATTTGAAGGATCATTCTATAAGTGGAAATTTATGCAAAATTAAACATACACAGAGCGAGGGAAGTGACGTGGCTGTGCTAGAAAGTACGGGTAGCAAAGGATCTGTGCTAGTTAATGGGATACTTGTCAAGAAGAATACCAGCTGCGAGCTTAACTCCGGTGATGAGGTGGTTTTTGGCTTGCAGGGAAATCATTCTTATATTTTTCAACAAGTAAGCAATGAAGTTGCAGTTAAGGGTGCAGAAGTTCAGAGTGGCGTTGGTAAACTTGTGCAGCTTGAAAGGAGAAATGGAGACCCTTCAGCCGTTGCCGGGGCTTCTATTTTGGCTTCTCTTTCTAACCTCAGACAGGATCTTACAAGATGGAAGTCTCCATCTCAGACTTCCAGTAAACCTCACCAGGGTGCTGATGTTTCTATTCACACTGTTCTCCCTGATGGTACAGAAATTGAGCTCGATGGCCTGGAAAGCAACCCAGCTCCAAATTTAGGAACTGATAAAGCTGCTGATGCTGAAGCTAGCGACAAGAATTCTCCTGCGGATTGCGATCCCGAGGATGCGGGCGCAGAGCCAGGCAATGTAAAATTCTCTGGGGTATTGGAAGAAAGAAATGGTGCGGGGGACACACAAGCTGCATCGACTTCAGGTACATCCGTACGCTGTGCAGTTTTTAAAGAAGATGTTCATGCTGCAATACTGGATGGAAAAGAAATAGAAGTGTCCTTTGACAACTTCCCATACTATTTAAGTGAGAATACAAAAAATGTCCTGATTGCAGCTTGCTTTATACACCTGAAGCACAAAGAGCATGCGAAGTACACCACGGATCTTACCACCGTAAATCCTCGTATTTTACTTTCAGGACCTGCAGGGTCAGAAATATATCAGGAGATGCTTGTAAAAGCACTTGCGAATTACTTTGGGGCTAAACTGCTCATATTTGATAGCCATTTTCTTTTGGGTGGTTTATCTTCTAAGGAAGCTGAGCTGCTCAAAGATGGATTTAATGCTGAGAAATCTTGCAGCAGCACCAAACAGAGTCCTACAGCCACAGACATGGCTAGGAGCATGGATCCATCAGCCATTGAAATCGATACACCTAGCTCTTCAAATGCACCTACTCCACTTGGCCTTGAATCTCAAGCTAAGTTGGAAACTGATTGTGTACCATCTACCTCTGGGACAGCTAAAAATGGCTTGTTTAAACTAGGCGACCGGGTCAAGTATAGTCCCTCTTCTGGCTGTTTGTATCAGACATCTTCTTCAAGGGGTCCATCTAATGGAAGTCGGGGGAAGGTTGCCTTACTTTTCGATGATAATCCCTTGTCAAAAATTGGTGTAAGATTTGATAAACCTATACCTGATGGAGTTGATCTTGGAGGTCTCTGTGAGGGTGGTCAAGGATTTTTCTGCAATGTCACCGATCTTCGATTGGAAAACAGTGGCATTCAAGAACTCGACAAATTACTTATTAATACGTTGTTTGAGGCTGTATTGAGTGAGAGCAGAAATTCACCTTTCATTTTGTTCATGAAAGAAGCAGAAAAGTCTATTGTAGGAAATGGAGATCCATATTCATTTAAAAGTAAGCTTGAAAAGCTTCCCGACAATGTGGTGGTAATAGGTTCACACACTCACACCGACAATCGAAAGGAGAAGTCACATCCCGGGGGTTTGCTTTTTACAAAGTTTGGAAGCAATCAGACTGCCCTTCTTGACTTGGCTTTCCCGGATAGTTTCGGAAGATTACATGATAGGGGAAAAGAAATCCCAAAACCAAACAAAACTTTGACCAAGCTTTTTCCAAATAAAGTAACAATTCACATGCCACAGGATGAGGGGCTTCTAGCATCATGGAAACAGCAACTTGATCGAGATGTTGAGACTCTAAAAATCAAAGGAAATTTGCACAATTTGCGCACTGTTATAAGCCGTAGCGGGATGGAATGTGAAGGACTCGAGACCTTGAGTGTTAAGGATCTGACACTTACAAATGAAAATTCAGAGAAGATAGTGGGTTGGGCTTTAAGCCACCACCTGATGCAGAATTCTGAAGTTAACACTGATGCAAAGCTTGTGTTGTCTTGTGAGAGCATCCAGTATGGAATTGGGATCTTACAGGCTATCCAGAATGAGTCAAAGAGCCTGAAGAAGTCTCTTAAGGACGTTGTTACAGAAAACGAGTTTGAAAAGAGGCTTTTGGGTGATGTTATTCCCCCCAGTGACATTGGTGTTACTTTTGATGATATTGGGGCTCTTGAAAATGTTAAGGATACATTGAAGGAATTAGTAATGCTTCCTTTACAGAGGCCTGAACTTTTTTGCAAGGGGCAGTTAACCAAGCCATGCAAGGGCATTCTTTTATTTGGTCCCCCGGGAACAGGTAAGACAATGCTTGCCAAGGCAGTTGCTACTGACGCCGGGGCAAACTTCATCAATATTTCCATGTCAAGCATCACTTCTAAGTGGTTTGGTGAGGGTGAAAAATACGTTAAAGCTGTTTTCTCCCTGGCAAGTAAAATTGCTCCCAGTGTGATATTTGTTGATGAGGTTGATAGCATGTTGGGTCGGCGCGAAAATCCAGGGGAGCACGAGGCCATGCGAAAGATGAAAAATGAATTCATGGTGAACTGGGATGGCCTACGTACAAAGGATACTGAACGAGTTCTTGTGCTTGCAGCCACCAATAGACCTTATGACCTGGATGAGGCTGTCATACGAAGGCTGCCTCGGAGATTAATGGTAAATTTACCGGATGCTCCAAATAGAGCAAAAATATTGAAAGTTATACTCGCAAAAGAGGATCTGTCTTCTGATGTTGATCTGGGTGCAGTTGCAAGTATGACTGACGGATATTCTGGAAGTGATCTTAAGAACTTGTGTGTAACTGCTGCACACCGTCCTATTAAAGAGATATTAGAAAAGGAAAAAAAGGAACTTGCTGCCGCTCTAGAAGAGGGTAGACCTGCTCCTGCATTACGTGGAAGTGAAGATATCCGATCTTTAAACATGGAAGACTTCAAACATGCTCACCAACAGGTATGCGCAAGTGTTTCCTCTGAATCGGTAAATATGACGGAGCTTTTACAATGGAATGAACTCTATGGTGAAGGTGGTTCAAGAGTTAAAAAAGCACTCAGCTATTTCATGTGA 3657 0.4394 MVSTRRNSGSFSTSSSAANNNNSTAKRSSSSSDDKPPSSPSPKRQKADNGASASDKPMSPAENSKDLRTPEPPADPGECRHADAQIDEPVAADDKTDATPPIADGSSPTLVADKPRASFSSWSIYQKQNPNLEASAPWCRLLSQSAQNPNVGICTPNFTIGSSRNCNFHLKDHSISGNLCKIKHTQSEGSDVAVLESTGSKGSVLVNGILVKKNTSCELNSGDEVVFGLQGNHSYIFQQVSNEVAVKGAEVQSGVGKLVQLERRNGDPSAVAGASILASLSNLRQDLTRWKSPSQTSSKPHQGADVSIHTVLPDGTEIELDGLESNPAPNLGTDKAADAEASDKNSPADCDPEDAGAEPGNVKFSGVLEERNGAGDTQAASTSGTSVRCAVFKEDVHAAILDGKEIEVSFDNFPYYLSENTKNVLIAACFIHLKHKEHAKYTTDLTTVNPRILLSGPAGSEIYQEMLVKALANYFGAKLLIFDSHFLLGGLSSKEAELLKDGFNAEKSCSSTKQSPTATDMARSMDPSAIEIDTPSSSNAPTPLGLESQAKLETDCVPSTSGTAKNGLFKLGDRVKYSPSSGCLYQTSSSRGPSNGSRGKVALLFDDNPLSKIGVRFDKPIPDGVDLGGLCEGGQGFFCNVTDLRLENSGIQELDKLLINTLFEAVLSESRNSPFILFMKEAEKSIVGNGDPYSFKSKLEKLPDNVVVIGSHTHTDNRKEKSHPGGLLFTKFGSNQTALLDLAFPDSFGRLHDRGKEIPKPNKTLTKLFPNKVTIHMPQDEGLLASWKQQLDRDVETLKIKGNLHNLRTVISRSGMECEGLETLSVKDLTLTNENSEKIVGWALSHHLMQNSEVNTDAKLVLSCESIQYGIGILQAIQNESKSLKKSLKDVVTENEFEKRLLGDVIPPSDIGVTFDDIGALENVKDTLKELVMLPLQRPELFCKGQLTKPCKGILLFGPPGTGKTMLAKAVATDAGANFINISMSSITSKWFGEGEKYVKAVFSLASKIAPSVIFVDEVDSMLGRRENPGEHEAMRKMKNEFMVNWDGLRTKDTERVLVLAATNRPYDLDEAVIRRLPRRLMVNLPDAPNRAKILKVILAKEDLSSDVDLGAVASMTDGYSGSDLKNLCVTAAHRPIKEILEKEKKELAAALEEGRPAPALRGSEDIRSLNMEDFKHAHQQVCASVSSESVNMTELLQWNELYGEGGSRVKKALSYFM 1218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01631 1218 PANTHER AAA ATPASE, PUTATIVE (AFU_ORTHOLOGUE AFUA_2G12920)-RELATED-RELATED 91 1218 - -
Car05g01631 1218 Pfam FHA domain 159 228 IPR000253 GO:0005515
Car05g01631 1218 SUPERFAMILY SMAD/FHA domain 118 235 IPR008984 GO:0005515
Car05g01631 1218 MobiDBLite consensus disorder prediction 68 94 - -
Car05g01631 1218 Pfam ATPase family associated with various cellular activities (AAA) 954 1083 IPR003959 GO:0005524|GO:0016887
Car05g01631 1218 Coils Coil 874 894 - -
Car05g01631 1218 MobiDBLite consensus disorder prediction 319 361 - -
Car05g01631 1218 MobiDBLite consensus disorder prediction 1 112 - -
Car05g01631 1218 MobiDBLite consensus disorder prediction 1 48 - -
Car05g01631 1218 Pfam AAA+ lid domain 1107 1142 IPR041569 -
Car05g01631 1218 PANTHER ATPASE FAMILY AAA DOMAIN-CONTAINING PROTEIN 1-A ISOFORM 1 91 1218 - -
Car05g01631 1218 CDD AAA 952 1085 - -
Car05g01631 1218 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 913 1193 IPR027417 -
Car05g01631 1218 ProSitePatterns AAA-protein family signature. 1057 1076 IPR003960 GO:0005524|GO:0016887
Car05g01631 1218 Gene3D - 912 1193 IPR027417 -
Car05g01631 1218 SMART AAA_5 950 1087 IPR003593 -
Car05g01631 1218 MobiDBLite consensus disorder prediction 337 351 - -
Car05g01631 1218 Gene3D - 1086 1180 - -
Car05g01631 1218 Gene3D - 137 246 - -
Car05g01631 1218 CDD FHA 138 238 IPR000253 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01631 Car-Chr5 61078887 61092306 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01631 913 1161 Calmodulin-binding Proteins AT3G56690 40.625 1.71e-42 167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01631 - - gmx:100780098 1973.36
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01631 05 61078887 61092306 Car05g01631 05 61078887 61092306 ECH
Car07g01148 07 10249884 10262627 Car05g01631 05 61078887 61092306 PCT