Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01616 ATGCTGGGAATTAGTTGGAATCGTCAATGGATAAATTATGTTGTTTTAAGTCTTCATACTCTCAGTTCTGATTTGGGGCATGGTGGATCAACGGCCGTAACTGCGATATTGATTGATGGAAGAAAGCTATGGATAGCTAATGTTGGAGACTCGCGAGCTGTTCTATCGAGAAAAGGGCAAGCCGCACAAATGACTATAGATCATGAACCCAACACGGAACGAGGTAGCATTGAGACTAGTGGTGGTTTTGTCTCCAACTTTCCTGGTGACGTGCCAAGAGTAAACGGGCAGCTGGCTGTTTCTCGCGCTTTTGGCGACAAGAGTCTCAAGTTGCACTTGCGATCGGACCCTGATGTACTAACTACTGATATTGACGTTGATACTGAAATTCTAATCCTTGCAAGTGATGGACTTTGGAAGGTAATGGCTAATCAAGAGGCAGTGGACATTGCTCAAAGAATGAAAGATCCACAGAAAGCAGCAAAGCAACTAACAGCTGAAGCAATAAAAAGAGACAGTAAAGATGATATATCTTGTGTTGTGGTTAAATTCAGTGTTTGGACGGAGATTGGTCCTATTATCCTAGGTTGTATACAACATTATTTGATTGGCATGTACTCTCTTTTCTCTGTTCCATTTTGCCAAATGGAAGGAGGTGCACAAGTTGGCATTCTAAAGTTTTTCCATGATTCAGTCAAACAAGCTTTTGGTACAAATGCATTTTACACAAATCATTTCATGGAATGA 747 0.4123 MLGISWNRQWINYVVLSLHTLSSDLGHGGSTAVTAILIDGRKLWIANVGDSRAVLSRKGQAAQMTIDHEPNTERGSIETSGGFVSNFPGDVPRVNGQLAVSRAFGDKSLKLHLRSDPDVLTTDIDVDTEILILASDGLWKVMANQEAVDIAQRMKDPQKAAKQLTAEAIKRDSKDDISCVVVKFSVWTEIGPIILGCIQHYLIGMYSLFSVPFCQMEGGAQVGILKFFHDSVKQAFGTNAFYTNHFME 248
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01616 248 SUPERFAMILY PP2C-like 10 185 IPR036457 -
Car05g01616 248 ProSiteProfiles PPM-type phosphatase domain profile. 1 184 IPR001932 -
Car05g01616 248 CDD PP2Cc 11 184 IPR001932 -
Car05g01616 248 SMART PP2C_4 4 182 IPR001932 -
Car05g01616 248 PANTHER PROTEIN PHOSPHATASE 2C 22 185 IPR015655 GO:0004722|GO:0006470
Car05g01616 248 Pfam Protein phosphatase 2C 25 177 IPR001932 -
Car05g01616 248 Gene3D - 9 190 IPR036457 -
Car05g01616 248 PANTHER PROTEIN PHOSPHATASE 2C 10-RELATED 22 185 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01616 Car-Chr5 60886319 60888617 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01616 22 184 PP2C-type Phosphatase Gene Family AT1G22280 74.847 1.70e-86 257
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01616 K17506 - gmx:100797292 288.885
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01616 05 60886319 60888617 Car05g01616 05 60886319 60888617 ECH