Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01604 ATGACGAACCAGAATAATAATGTAGTAAGACCTGAAGTTAATTCATGCATTAACACTCTTATTTCTGGACCTGAATCCATGGCTGTTCTTGGTGAGTTTTTGGGTTTCTCTCATAGTAATTTTATAAAGAGGTTGGATTTGGAAGGAGCTAACGTTAATGCTTGGATTGATTTAATGAGAGCTGCTTCTCCAACTCGTTCAGAAAATCAAGAAAAAAGTTCTTGGATTCTTTATCATCCTTCAGCGATTAAATTGTTTGATGAGATAATATATAGTGCAAAGGGAAAGGAGATTGTGTTTTTTCTTGACTATGATGGAACTCTCTCACCGATTGTTGCGGATCCAGATAAAGCTTTCATGACTAGAAAGATGAGAGCAACGCTTAAGGACATAGCAAGACATTTTCCAACAGCCATCGTGACTGGAAGGTGCAGAGACAAGGTATTTAATTTTGTAAAATTAGCAGAACTATACTACGCAGCAAGCCATGGCATGGATATAATGGGACCGACAAAAAACGGAAGTGCTGTGAAAAGtaataataataataatactaacaaAGCAGTGCTGTTCCAACCTGCTGGTCAATTCTTGCCTATGATTGATGAGGTGTACAAAATATTGTTAGAAAAAACAAAGTGTGTTCCAGGAGCTAAGGTAGAGAACAACAAATTTTGCTTGTCCGTGCACTTCCGTTGTGTTGACGAAAAGAGTTGGGCTCCTTTGGCGGAGAAAGTTAGATTGGTGCTAAATGAATACCCAAAACTTAGGCTTACACAAGGGAGAAAAGTGCTGGAGATTCGTCCCACCATTAAATGGGACAAAGGCAAGGCTCTTGAATTTTTGTTGGAATCGTTAGGATACGAGAATTCTAATGATGTATTTCCAATTTATATCGGTGATGATCGAACTGATGAGGATGCTTTTAAGGTTTTGCGAAGAAGGGGTCAAGGGGTTGGGATTCTTGTTTCTAGTGTTCCAAAAGAAACAGACGCTTCCTACACACTGCAAGATCCATCAGAGGTTGAGCATTTTTTGCGGCGATTGGTGGAATGGAAAAGATCGAGTAATGTGAACCCCACAAGCGCATAG 1092 0.391 MTNQNNNVVRPEVNSCINTLISGPESMAVLGEFLGFSHSNFIKRLDLEGANVNAWIDLMRAASPTRSENQEKSSWILYHPSAIKLFDEIIYSAKGKEIVFFLDYDGTLSPIVADPDKAFMTRKMRATLKDIARHFPTAIVTGRCRDKVFNFVKLAELYYAASHGMDIMGPTKNGSAVKSNNNNNTNKAVLFQPAGQFLPMIDEVYKILLEKTKCVPGAKVENNKFCLSVHFRCVDEKSWAPLAEKVRLVLNEYPKLRLTQGRKVLEIRPTIKWDKGKALEFLLESLGYENSNDVFPIYIGDDRTDEDAFKVLRRRGQGVGILVSSVPKETDASYTLQDPSEVEHFLRRLVEWKRSSNVNPTSA 363
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01604 363 PANTHER TREHALOSE-PHOSPHATE PHOSPHATASE C-RELATED 29 358 - -
Car05g01604 363 SUPERFAMILY HAD-like 99 352 IPR036412 -
Car05g01604 363 PANTHER TREHALOSE 6-PHOSPHATE PHOSPHATASE 29 358 IPR044651 GO:0004805|GO:0005992
Car05g01604 363 Gene3D - 98 199 IPR023214 -
Car05g01604 363 Gene3D - 219 361 IPR023214 -
Car05g01604 363 CDD HAD_TPP 99 342 - -
Car05g01604 363 Pfam Trehalose-phosphatase 101 340 IPR003337 GO:0003824|GO:0005992
Car05g01604 363 TIGRFAM HAD-SF-IIB: HAD hydrolase, family IIB 100 315 IPR006379 -
Car05g01604 363 TIGRFAM T6PP: trehalose-phosphatase 96 350 IPR003337 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01604 Car-Chr5 60712733 60715117 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01604 94 359 Trehalose Biosynthesis Gene Families AT1G06410 24.555 1.01e-06 48.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01604 K01087 - gmx:100815979 558.14
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car02g01105 02 30697352 30700153 Car05g01604 05 60712733 60715117 PCT