Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Car05g01591 ATGTCTCCAATGGTTTCTCCAACTGACACAGATATGGAGAAAAACAAGCCAGATGAGAGAAATTTGCTACCTTCATATGATCAAGCACCATACGCACACAAAGTTGCAATTCCTCCAAGACAGAACTTATTCAAGGAATTCCAATACACTGTAAAAGAAACATTCTTTGCTGATGATCCTCTAAGATCCTTCAAAGACCAAACGAATTCGCGAAAGTTAGTCCTCGGTATTGAGGCCATATTCCCTATACTTAATTGGGGTAGAACTTACAACCTTCAAAAATTTAGAGGAGATTTAATAGCTGGTCTCACTATTGCAAGTCTTTGCATACCTCAGGATATTGGATACTCCAAGCTTGCACATTTGGCTCCACAGTATGGACTATACTCCAGCTTTGTTCCACCACTGATTTATGCATTCATGGGTAGTTCCCGCGATATTGCAATAGGACCTGTGGCAGTGGTTTCTCTCTTGTTGGGGACTTTGCTTAGTAATGAGATTGATCCTGTTACACATGCAGCAGAATATCAGCGACTTGCCTTTACAGCCACTTTTTTTGCTGGGATTACACAAGCAACACTTGGGATTTTCAGGTTAGGATTTTTGATTGATTTCCTATCCCATGCTGCTATTGTTGGTTTTATGGGCGGTGCTGCCATCACAATTGCACTTCAACAGCTAAAGGGTTTCCTTGGCATCCCTACTAAAATGTTCACAACAAAAACCGATATTATATCGGTGTTGCGCGCAGTATTCTCATCAGCACATCATGGATGGAACTGGCAAACTATATTAATCGGAGCTAGCTTTTTGTGTTTTCTTCTGGTCGCCAAATATATTGTAAATCACATAGAGAAAGGGATCAATCCTTCATCTGTTAAAGAAATTTATTTTAGCGGCGATTACCTTGGAAAAGGCTTTAAAATTGGCGTCATGGCAGGCATGATCGCACTGACCGAAGCCATAGCTATTGGAAGAACATTTGCTTCTATGAAGGACTATTCACTGGATGGAAACAGAGAAATGGTGGCATTAGGAACAATGAATATTGTTGGTTCGATGACTTCCTGTTATGTGGCAACTGGTTCTTTCTCTCGGTCGGCGGTAAATTACATGGCTGGCTGCCAAACTGCAGTCTCTAATATTGTGATGTCAATAGTTGTTTTTTTAACACTGCAATTCATCACTCCTCTTTTTAAGTACACTCCAAATGCAATTCTTGCTTCCATCATCATTTCGGCTGTCATCAACCTTGTGGACTATCAGGCAGCAATTTTGATTTGGAAGATTGATAAATTTGATTTTATTGCTTGCATGGGAGCATTCTTTGGAGTTGTTTTCGTCTCAGTTGAGATAGGACTTCTAATTGCTGTTTCTATATCCTTTGCAAAGATCCTATTACAAGTGACAAGGCCTCGAACAGCTATTTTAGGAAAGATTCCTGGAACTGCTGTCTATAGAAACATCCAACAATACCCAGAAGCTAGTAAGGTTTCAGGTGTACTCATTGTCAGAGTTGATTCTGCAATATACTTTTCCAACTCCAACTATGTTAAAGAAAGGATATTAAGATGGCTTACAGATGAAGAAACGGTAAAAGGAGACTACCACACAAAAATTCAGTTTTTGATAGTTGAAATGTCACCTGTTACTGACATTGATACAAGTGGCATACAAGCCTTTGAAGAGTTACATAGAAGTCTTGAGAAAAGAGGTGTTCAGCTAGTTCTGGCAAATCCTGGTTCTGCAGTGACAGACAAACTTTACACTTCAAATTTTGCAAACGTAGTTGGTGAGGACAAGATCTTCCTCACAGTTGCAGAGGCTGTTGCATATTGTTCTCCAAAGTTGGATGAGAACCCATGA 1866 0.3987 MSPMVSPTDTDMEKNKPDERNLLPSYDQAPYAHKVAIPPRQNLFKEFQYTVKETFFADDPLRSFKDQTNSRKLVLGIEAIFPILNWGRTYNLQKFRGDLIAGLTIASLCIPQDIGYSKLAHLAPQYGLYSSFVPPLIYAFMGSSRDIAIGPVAVVSLLLGTLLSNEIDPVTHAAEYQRLAFTATFFAGITQATLGIFRLGFLIDFLSHAAIVGFMGGAAITIALQQLKGFLGIPTKMFTTKTDIISVLRAVFSSAHHGWNWQTILIGASFLCFLLVAKYIVNHIEKGINPSSVKEIYFSGDYLGKGFKIGVMAGMIALTEAIAIGRTFASMKDYSLDGNREMVALGTMNIVGSMTSCYVATGSFSRSAVNYMAGCQTAVSNIVMSIVVFLTLQFITPLFKYTPNAILASIIISAVINLVDYQAAILIWKIDKFDFIACMGAFFGVVFVSVEIGLLIAVSISFAKILLQVTRPRTAILGKIPGTAVYRNIQQYPEASKVSGVLIVRVDSAIYFSNSNYVKERILRWLTDEETVKGDYHTKIQFLIVEMSPVTDIDTSGIQAFEELHRSLEKRGVQLVLANPGSAVTDKLYTSNFANVVGEDKIFLTVAEAVAYCSPKLDENP 621
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Car05g01591 621 Gene3D STAS domain 471 616 IPR036513 -
Car05g01591 621 ProSiteProfiles STAS domain profile. 491 613 IPR002645 -
Car05g01591 621 SUPERFAMILY SpoIIaa-like 493 614 IPR036513 -
Car05g01591 621 CDD STAS_SulP_like_sulfate_transporter 492 606 - -
Car05g01591 621 Pfam Sulfate permease family 95 295 IPR011547 GO:0016021
Car05g01591 621 PANTHER HIGH AFFINITY SULFATE TRANSPORTER TYPE 1 280 621 - -
Car05g01591 621 PANTHER HIGH AFFINITY SULFATE TRANSPORTER TYPE 1 24 280 - -
Car05g01591 621 Pfam STAS domain 492 609 IPR002645 -
Car05g01591 621 ProSitePatterns SLC26A transporters signature. 124 145 IPR018045 GO:0008271|GO:0008272
Car05g01591 621 PANTHER SULFATE TRANSPORTER 280 621 IPR001902 GO:0015301|GO:0016020|GO:0055085
Car05g01591 621 MobiDBLite consensus disorder prediction 1 23 - -
Car05g01591 621 PANTHER SULFATE TRANSPORTER 24 280 IPR001902 GO:0015301|GO:0016020|GO:0055085
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Car05g01591 Car-Chr5 60552535 60556815 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Car05g01591 1 620 Inorganic Solute Cotransporters AT1G22150 70.713 0.0 901
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Car05g01591 K17470 - gmx:100804208 1019.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Car05g01591 05 60552535 60556815 Car05g01591 05 60552535 60556815 ECH
Car02g01081 02 28569384 28573731 Car05g01591 05 60552535 60556815 PCT